Literature DB >> 15182178

Biochemical and structural basis for partially redundant enzymatic and transcriptional functions of DCoH and DCoH2.

Robert B Rose1, Kristi E Pullen, J Henri Bayle, Gerald R Crabtree, Tom Alber.   

Abstract

An inherited form of diabetes, maturity-onset diabetes of the young type 3 (MODY3), results from mutations in the transcriptional activator, hepatocyte nuclear factor-1alpha (HNF1alpha). Transcription by HNF1alpha is stimulated by the bifunctional coactivator DCoH (dimerization cofactor of HNF1). Strikingly, an HNF1alpha deletion in mice causes more severe phenotypes than a DCoH deletion. It has been hypothesized that a DCoH homolog, DCoH2, partially complements the DCoH deletion. To test this idea, we determined the biochemical properties and the 1.6-A-resolution crystal structure of DCoH2. Like DCoH, DCoH2 forms a tetramer, displays pterin-4alpha-carbinolamine dehydratase activity, and binds HNF1alpha in vivo and in vitro. DCoH and DCoH2 adopt identical folds with structural differences confined largely to the protein surfaces and the tetramer interface. In contrast to the hyperstable DCoH tetramer, DCoH2 readily disproportionates and forms a 2:2 complex with HNF1 in vitro. Phylogenetic analysis reveals six major subfamilies of DCoH proteins, including unique DCoH and DCoH2 branches in metazoans. These results suggest distinct roles for DCoH and DCoH2. Differences in conserved surface residues could mediate binding to different effectors. We propose that HNF1alpha binding kinetics may distinguish regulation by DCoH2, under thermodynamic control, from regulation by DCoH, under kinetic control.

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Year:  2004        PMID: 15182178     DOI: 10.1021/bi049620t

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  8 in total

1.  Phylogenomic and functional analysis of pterin-4a-carbinolamine dehydratase family (COG2154) proteins in plants and microorganisms.

Authors:  Valeria Naponelli; Alexandre Noiriel; Michael J Ziemak; Stephen M Beverley; Lon-Fye Lye; Andrew M Plume; José Ramon Botella; Karen Loizeau; Stéphane Ravanel; Fabrice Rébeillé; Valérie de Crécy-Lagard; Andrew D Hanson
Journal:  Plant Physiol       Date:  2008-02-01       Impact factor: 8.340

2.  Interactions with the bifunctional interface of the transcriptional coactivator DCoH1 are kinetically regulated.

Authors:  Dongli Wang; Matthew W Coco; Robert B Rose
Journal:  J Biol Chem       Date:  2014-12-23       Impact factor: 5.157

3.  Quantitative proteomic analysis of S-nitrosated proteins in diabetic mouse liver with ICAT switch method.

Authors:  Xu Zhang; Bo Huang; Xixi Zhou; Chang Chen
Journal:  Protein Cell       Date:  2010-07-29       Impact factor: 14.870

4.  Intestine-specific deletion of SIRT1 in mice impairs DCoH2-HNF-1α-FXR signaling and alters systemic bile acid homeostasis.

Authors:  Nevzat Kazgan; Mallikarjuna R Metukuri; Aparna Purushotham; Jing Lu; Anuradha Rao; Sangkyu Lee; Matthew Pratt-Hyatt; Andrew Lickteig; Iván L Csanaky; Yingming Zhao; Paul A Dawson; Xiaoling Li
Journal:  Gastroenterology       Date:  2013-12-31       Impact factor: 22.682

5.  Pterin-based pigmentation in animals.

Authors:  Pedro Andrade; Miguel Carneiro
Journal:  Biol Lett       Date:  2021-08-18       Impact factor: 3.812

6.  Evolution of pigment synthesis pathways by gene and genome duplication in fish.

Authors:  Ingo Braasch; Manfred Schartl; Jean-Nicolas Volff
Journal:  BMC Evol Biol       Date:  2007-05-11       Impact factor: 3.260

Review 7.  Rubisco Assembly in the Chloroplast.

Authors:  Anna Vitlin Gruber; Leila Feiz
Journal:  Front Mol Biosci       Date:  2018-03-13

8.  Solution NMR structures of proteins VPA0419 from Vibrio parahaemolyticus and yiiS from Shigella flexneri provide structural coverage for protein domain family PFAM 04175.

Authors:  Kiran Kumar Singarapu; Jeffrey L Mills; Rong Xiao; Thomas Acton; Marco Punta; Markus Fischer; Barry Honig; Burkhard Rost; Gaetano T Montelione; Thomas Szyperski
Journal:  Proteins       Date:  2010-02-15
  8 in total

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