Literature DB >> 15178194

Simulated complex dynamics of glycolysis in the protozoan parasite Trypanosoma brucei.

Ali Navid1, Peter J Ortoleva.   

Abstract

Glycolysis in Trypanosoma brucei was modeled using a reaction transport simulator and tested for possible complex dynamics. The glycolytic model is multi-compartmentalized and accounts for the exchange of metabolites between the glycosomes, cytosol, mitochondrion and the host medium. The model is used to examine the effects of a range of culture medium concentrations of oxygen on the glycolysis of T. brucei. Our results are in good agreement with steady-state experiments. We also find that under aerobic conditions, increasing the activity of glycerol-3-phosphate dehydrogenase induces complex dynamics in the system. We report the presence of three distinct types of these dynamics. Varying the oxygen concentration in the medium can induce the transition between these dynamics.

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Year:  2004        PMID: 15178194     DOI: 10.1016/j.jtbi.2004.02.007

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  3 in total

1.  In silico Geobacter sulfurreducens metabolism and its representation in reactive transport models.

Authors:  E L King; K Tuncay; P Ortoleva; C Meile
Journal:  Appl Environ Microbiol       Date:  2008-11-14       Impact factor: 4.792

2.  Kinetic Characterisation of Phosphofructokinase Purified from Setaria cervi: A Bovine Filarial Parasite.

Authors:  Bechan Sharma
Journal:  Enzyme Res       Date:  2011-09-15

3.  Transcriptional regulatory network discovery via multiple method integration: application to e. coli K12.

Authors:  Jingjun Sun; Kagan Tuncay; Alaa Abi Haidar; Lisa Ensman; Frank Stanley; Michael Trelinski; Peter Ortoleva
Journal:  Algorithms Mol Biol       Date:  2007-03-30       Impact factor: 1.405

  3 in total

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