Literature DB >> 15173570

Methods for transcriptional profiling in plants. Be fruitful and replicate.

Blake C Meyers1, David W Galbraith, Timothy Nelson, Vikas Agrawal.   

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Year:  2004        PMID： 15173570      PMCID： PMC514100          DOI： 10.1104/pp.104.040840

Source DB:  PubMed          Journal:  Plant Physiol        ISSN： 0032-0889            Impact factor:   8.340


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  138 in total

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Journal:  Trends Plant Sci       Date:  2000-01       Impact factor: 18.313

2.  A systematic statistical linear modeling approach to oligonucleotide array experiments.

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Journal:  Math Biosci       Date:  2002-03       Impact factor: 2.144

3.  Laser capture microdissection of cells from plant tissues.

Authors:  Nancy M Kerk; Teresa Ceserani; S Lorraine Tausta; Ian M Sussex; Timothy M Nelson
Journal:  Plant Physiol       Date:  2003-05       Impact factor: 8.340

4.  Annotation of the Arabidopsis genome.

Authors:  Jennifer R Wortman; Brian J Haas; Linda I Hannick; Roger K Smith; Rama Maiti; Catherine M Ronning; Agnes P Chan; Chunhui Yu; Mulu Ayele; Catherine A Whitelaw; Owen R White; Christopher D Town
Journal:  Plant Physiol       Date:  2003-06       Impact factor: 8.340

Review 5.  Role of microRNAs in plant and animal development.

Authors:  James C Carrington; Victor Ambros
Journal:  Science       Date:  2003-07-18       Impact factor: 47.728

6.  Using the transcriptome to annotate the genome.

Authors:  Saurabh Saha; Andrew B Sparks; Carlo Rago; Viatcheslav Akmaev; Clarence J Wang; Bert Vogelstein; Kenneth W Kinzler; Victor E Velculescu
Journal:  Nat Biotechnol       Date:  2002-05       Impact factor: 54.908

7.  Combined transcriptome and genome analysis of single micrometastatic cells.

Authors:  Christoph A Klein; Stefan Seidl; Karina Petat-Dutter; Sonja Offner; Jochen B Geigl; Oleg Schmidt-Kittler; Nicole Wendler; Bernward Passlick; Rudolf M Huber; Günter Schlimok; Patrick A Baeuerle; Gert Riethmüller
Journal:  Nat Biotechnol       Date:  2002-04       Impact factor: 54.908

8.  Sensitivity of 70-mer oligonucleotides and cDNAs for microarray analysis of gene expression in Arabidopsis and its related species.

Authors:  Hyeon-Se Lee; Jianlin Wang; Lu Tian; Hongmei Jiang; Michael A Black; Andreas Madlung; Brian Watson; Lewis Lukens; J Chris Pires; Jiyuan J Wang; Luca Comai; Thomas C Osborn; R W Doerge; Z Jeffrey Chen
Journal:  Plant Biotechnol J       Date:  2004-01       Impact factor: 9.803

9.  Gene expression profiles during the initial phase of salt stress in rice.

Authors:  S Kawasaki; C Borchert; M Deyholos; H Wang; S Brazille; K Kawai; D Galbraith; H J Bohnert
Journal:  Plant Cell       Date:  2001-04       Impact factor: 11.277

10.  A novel design of whole-genome microarray probes for Saccharomyces cerevisiae which minimizes cross-hybridization.

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Journal:  BMC Genomics       Date:  2003-09-22       Impact factor: 3.969
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  25 in total

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Journal:  Ann Bot       Date:  2010-04-21       Impact factor: 4.357

2.  Overlaps in the transcriptional profiles of Medicago truncatula roots inoculated with two different Glomus fungi provide insights into the genetic program activated during arbuscular mycorrhiza.

Authors:  Natalija Hohnjec; Martin F Vieweg; Alfred Pühler; Anke Becker; Helge Küster
Journal:  Plant Physiol       Date:  2005-03-18       Impact factor: 8.340

Review 3.  Morphogenesis of flowers--our evolving view.

Authors:  David R Smyth
Journal:  Plant Cell       Date:  2005-02       Impact factor: 11.277

4.  Transcript analysis of early nodulation events in Medicago truncatula.

Authors:  Dasharath Prasad Lohar; Natalya Sharopova; Gabriella Endre; Silvia Peñuela; Deborah Samac; Christopher Town; Kevin A T Silverstein; Kathryn A VandenBosch
Journal:  Plant Physiol       Date:  2005-12-23       Impact factor: 8.340

5.  Transcriptional profiling of wheat caryopsis development using cDNA microarrays.

Authors:  Debbie L Laudencia-Chingcuanco; Boryana S Stamova; Frank M You; Gerard R Lazo; Diane M Beckles; Olin D Anderson
Journal:  Plant Mol Biol       Date:  2007-01-09       Impact factor: 4.076

6.  EST sequencing and time course microarray hybridizations identify more than 700 Medicago truncatula genes with developmental expression regulation in flowers and pods.

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Journal:  Planta       Date:  2005-06-21       Impact factor: 4.116

7.  Defining diversity, specialization, and gene specificity in transcriptomes through information theory.

Authors:  Octavio Martínez; M Humberto Reyes-Valdés
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-07       Impact factor: 11.205

8.  System analysis of an Arabidopsis mutant altered in de novo fatty acid synthesis reveals diverse changes in seed composition and metabolism.

Authors:  Mingjie Chen; Brian P Mooney; Martin Hajduch; Trupti Joshi; Mingyi Zhou; Dong Xu; Jay J Thelen
Journal:  Plant Physiol       Date:  2009-03-11       Impact factor: 8.340

9.  Comparative transcripts profiling reveals new insight into molecular processes regulating lycopene accumulation in a sweet orange (Citrus sinensis) red-flesh mutant.

Authors:  Qiang Xu; Keqin Yu; Andan Zhu; Junli Ye; Qing Liu; Jianchen Zhang; Xiuxin Deng
Journal:  BMC Genomics       Date:  2009-11-18       Impact factor: 3.969

10.  Discovery of cis-elements between sorghum and rice using co-expression and evolutionary conservation.

Authors:  Xi Wang; Georg Haberer; Klaus F X Mayer
Journal:  BMC Genomics       Date:  2009-06-26       Impact factor: 3.969
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