Literature DB >> 15165141

Variations in cyclotide expression in viola species.

Manuela Trabi1, Erika Svangård, Anders Herrmann, Ulf Göransson, Per Claeson, David J Craik, Lars Bohlin.   

Abstract

Cyclotides, a family of approximately 50 mini-proteins isolated from various Violaceae and Rubiaceae plants, are characterized by their circular peptide backbone and six conserved cysteine residues arranged in a cystine knot motif. Cyclotides show a wide range of biological activities, making them interesting targets for both pharmaceutical and agrochemical research, but little is known about their natural function and the events that trigger their expression. An investigation of the geographical and seasonal variations of cyclotide profiles has been performed, using the native Australian violet, Viola hederacea, and the Swedish sweet violet, Viola odorata, as model plants. The results showed that in the Australian violet the relative peptide levels of some cyclotides remained almost constant throughout the year, while other cyclotides were present only at certain times of the year. Therefore, it appears that V. hederacea expresses a basic armory of cyclotides as well as special "add-ons" whose levels are influenced by external factors. In the Swedish violet, cyclotide levels were increased up to 14 times during the warmest period of the year. The larger variation in expression levels of the Swedish plants may be a reflection of a greater climatic variation.

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Year:  2004        PMID: 15165141     DOI: 10.1021/np034068e

Source DB:  PubMed          Journal:  J Nat Prod        ISSN: 0163-3864            Impact factor:   4.050


  29 in total

Review 1.  Circular proteins from plants and fungi.

Authors:  Ulf Göransson; Robert Burman; Sunithi Gunasekera; Adam A Strömstedt; K Johan Rosengren
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

2.  Do plant cyclotides have potential as immunosuppressant peptides?

Authors:  Carsten Gründemann; Johannes Koehbach; Roman Huber; Christian W Gruber
Journal:  J Nat Prod       Date:  2012-01-24       Impact factor: 4.050

3.  A novel suite of cyclotides from Viola odorata: sequence variation and the implications for structure, function and stability.

Authors:  David C Ireland; Michelle L Colgrave; David J Craik
Journal:  Biochem J       Date:  2006-11-15       Impact factor: 3.857

4.  Two Blast-independent tools, CyPerl and CyExcel, for harvesting hundreds of novel cyclotides and analogues from plant genomes and protein databases.

Authors:  Jun Zhang; Zhengshuang Hua; Zebo Huang; QiZhu Chen; Qingyun Long; David J Craik; Alan J M Baker; Wensheng Shu; Bin Liao
Journal:  Planta       Date:  2014-12-21       Impact factor: 4.116

5.  Discovery of cyclotide-like protein sequences in graminaceous crop plants: ancestral precursors of circular proteins?

Authors:  Jason P Mulvenna; Joshua S Mylne; Rekha Bharathi; Rachel A Burton; Neil J Shirley; Geoffrey B Fincher; Marilyn A Anderson; David J Craik
Journal:  Plant Cell       Date:  2006-08-25       Impact factor: 11.277

6.  Structural determinants for peptide-bond formation by asparaginyl ligases.

Authors:  Xinya Hemu; Abbas El Sahili; Side Hu; Kaho Wong; Yu Chen; Yee Hwa Wong; Xiaohong Zhang; Aida Serra; Boon Chong Goh; Dina A Darwis; Ming Wei Chen; Siu Kwan Sze; Chuan-Fa Liu; Julien Lescar; James P Tam
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-23       Impact factor: 11.205

7.  Gas-Phase Sequencing of Cyclotides: Introduction of Selective Ring Opening at Dehydroalanine via Ion/Ion Reaction.

Authors:  David J Foreman; Nicole C Parsley; John T Lawler; Uma K Aryal; Leslie M Hicks; Scott A McLuckey
Journal:  Anal Chem       Date:  2019-12-03       Impact factor: 6.986

Review 8.  Ligand-based peptide design and combinatorial peptide libraries to target G protein-coupled receptors.

Authors:  Christian W Gruber; Markus Muttenthaler; Michael Freissmuth
Journal:  Curr Pharm Des       Date:  2010       Impact factor: 3.116

9.  Distribution and evolution of circular miniproteins in flowering plants.

Authors:  Christian W Gruber; Alysha G Elliott; David C Ireland; Piero G Delprete; Steven Dessein; Ulf Göransson; Manuela Trabi; Conan K Wang; Andrew B Kinghorn; Elmar Robbrecht; David J Craik
Journal:  Plant Cell       Date:  2008-09-30       Impact factor: 11.277

Review 10.  Cyclotides, a versatile ultrastable micro-protein scaffold for biotechnological applications.

Authors:  Julio A Camarero
Journal:  Bioorg Med Chem Lett       Date:  2017-10-21       Impact factor: 2.823

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