Literature DB >> 15163362

Additional paper: computational resources for metabolomics.

Masanori Arita1.   

Abstract

Metabolomics, a comprehensive extension of traditional targeted metabolite analysis, has recently attracted much attention as the biological jigsaw puzzle's missing piece that can complement transcriptome and proteome analysis. This tutorial survey introduces practical web resources with special emphasis on the computational aspects involved in processing and navigating metabolome data. The introduced materials are also accessible from the author's web directory (Atomic Reconstruction of Metabolism or ARM).

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Year:  2004        PMID: 15163362     DOI: 10.1093/bfgp/3.1.84

Source DB:  PubMed          Journal:  Brief Funct Genomic Proteomic        ISSN: 1473-9550


  5 in total

Review 1.  Stable isotope-resolved metabolomics and applications for drug development.

Authors:  Teresa W-M Fan; Pawel K Lorkiewicz; Katherine Sellers; Hunter N B Moseley; Richard M Higashi; Andrew N Lane
Journal:  Pharmacol Ther       Date:  2011-12-23       Impact factor: 12.310

Review 2.  Genomic medicine: genetic variation and its impact on the future of health care.

Authors:  Huntington F Willard; Misha Angrist; Geoffrey S Ginsburg
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-08-29       Impact factor: 6.237

3.  Enhancement of plant metabolite fingerprinting by machine learning.

Authors:  Ian M Scott; Cornelia P Vermeer; Maria Liakata; Delia I Corol; Jane L Ward; Wanchang Lin; Helen E Johnson; Lynne Whitehead; Baldeep Kular; John M Baker; Sean Walsh; Anuja Dave; Tony R Larson; Ian A Graham; Trevor L Wang; Ross D King; John Draper; Michael H Beale
Journal:  Plant Physiol       Date:  2010-06-21       Impact factor: 8.340

4.  Dynamic Metabolic Footprinting Reveals the Key Components of Metabolic Network in Yeast Saccharomyces cerevisiae.

Authors:  Pramote Chumnanpuen; Michael Adsetts Edberg Hansen; Jørn Smedsgaard; Jens Nielsen
Journal:  Int J Genomics       Date:  2014-01-29       Impact factor: 2.326

5.  GEM System: automatic prototyping of cell-wide metabolic pathway models from genomes.

Authors:  Kazuharu Arakawa; Yohei Yamada; Kosaku Shinoda; Yoichi Nakayama; Masaru Tomita
Journal:  BMC Bioinformatics       Date:  2006-03-23       Impact factor: 3.169

  5 in total

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