Literature DB >> 15161972

A genome-wide screen for Saccharomyces cerevisiae deletion mutants that affect telomere length.

Syed H Askree1, Tal Yehuda, Sarit Smolikov, Raya Gurevich, Joshua Hawk, Carrie Coker, Anat Krauskopf, Martin Kupiec, Michael J McEachern.   

Abstract

Telomeres are nucleoprotein structures present at the ends of eukaryotic chromosomes that play a central role in guarding the integrity of the genome by protecting chromosome ends from degradation and fusion. Length regulation is central to telomere function. To broaden our knowledge about the mechanisms that control telomere length, we have carried out a systematic examination of approximately 4,800 haploid deletion mutants of Saccharomyces cerevisiae for telomere-length alterations. By using this screen, we have identified >150 candidate genes not previously known to affect telomere length. In two-thirds of the identified mutants, short telomeres were observed; whereas in one-third, telomeres were lengthened. The genes identified are very diverse in their functions, but certain categories, including DNA and RNA metabolism, chromatin modification, and vacuolar traffic, are overrepresented. Our results greatly enlarge the number of known genes that affect telomere metabolism and will provide insights into how telomere function is linked to many other cellular processes.

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Year:  2004        PMID: 15161972      PMCID: PMC423251          DOI: 10.1073/pnas.0401263101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  62 in total

1.  Effects of yeast DNA topoisomerase III on telomere structure.

Authors:  R A Kim; P R Caron; J C Wang
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-28       Impact factor: 11.205

2.  Nuclear architecture and spatial positioning help establish transcriptional states of telomeres in yeast.

Authors:  Frank Feuerbach; Vincent Galy; Edgar Trelles-Sticken; Micheline Fromont-Racine; Alain Jacquier; Eric Gilson; Jean-Christophe Olivo-Marin; Harry Scherthan; Ulf Nehrbass
Journal:  Nat Cell Biol       Date:  2002-03       Impact factor: 28.824

3.  Specific DNA replication mutations affect telomere length in Saccharomyces cerevisiae.

Authors:  A K Adams; C Holm
Journal:  Mol Cell Biol       Date:  1996-09       Impact factor: 4.272

4.  Senescence mutants of Saccharomyces cerevisiae with a defect in telomere replication identify three additional EST genes.

Authors:  T S Lendvay; D K Morris; J Sah; B Balasubramanian; V Lundblad
Journal:  Genetics       Date:  1996-12       Impact factor: 4.562

5.  Quantitative phenotypic analysis of yeast deletion mutants using a highly parallel molecular bar-coding strategy.

Authors:  D D Shoemaker; D A Lashkari; D Morris; M Mittmann; R W Davis
Journal:  Nat Genet       Date:  1996-12       Impact factor: 38.330

6.  Saccharomyces Rrm3p, a 5' to 3' DNA helicase that promotes replication fork progression through telomeric and subtelomeric DNA.

Authors:  Andreas S Ivessa; Jin-Qiu Zhou; Vince P Schulz; Ellen K Monson; Virginia A Zakian
Journal:  Genes Dev       Date:  2002-06-01       Impact factor: 11.361

7.  Cyclin-dependent protein kinase and cyclin homologs SSN3 and SSN8 contribute to transcriptional control in yeast.

Authors:  S Kuchin; P Yeghiayan; M Carlson
Journal:  Proc Natl Acad Sci U S A       Date:  1995-04-25       Impact factor: 11.205

8.  New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae.

Authors:  A Wach; A Brachat; R Pöhlmann; P Philippsen
Journal:  Yeast       Date:  1994-12       Impact factor: 3.239

9.  Sfh1p, a component of a novel chromatin-remodeling complex, is required for cell cycle progression.

Authors:  Y Cao; B R Cairns; R D Kornberg; B C Laurent
Journal:  Mol Cell Biol       Date:  1997-06       Impact factor: 4.272

10.  Vesicle-mediated protein transport: regulatory interactions between the Vps15 protein kinase and the Vps34 PtdIns 3-kinase essential for protein sorting to the vacuole in yeast.

Authors:  J H Stack; D B DeWald; K Takegawa; S D Emr
Journal:  J Cell Biol       Date:  1995-04       Impact factor: 10.539

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  194 in total

1.  Reversibility of replicative senescence in Saccharomyces cerevisiae: effect of homologous recombination and cell cycle checkpoints.

Authors:  Sandra C Becerra; Hiranthi T Thambugala; Alison Russell Erickson; Christopher K Lee; L Kevin Lewis
Journal:  DNA Repair (Amst)       Date:  2011-11-09

2.  A genome-wide telomere screen in yeast: the long and short of it all.

Authors:  Dawn Edmonds; Bobby-Joe Breitkreutz; Lea Harrington
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-22       Impact factor: 11.205

Review 3.  Type 2C protein phosphatases in fungi.

Authors:  Joaquín Ariño; Antonio Casamayor; Asier González
Journal:  Eukaryot Cell       Date:  2010-11-12

4.  Systematic identification of gene annotation errors in the widely used yeast mutation collections.

Authors:  Taly Ben-Shitrit; Nir Yosef; Keren Shemesh; Roded Sharan; Eytan Ruppin; Martin Kupiec
Journal:  Nat Methods       Date:  2012-02-05       Impact factor: 28.547

5.  The yeast VPS genes affect telomere length regulation.

Authors:  Ofer Rog; Sarit Smolikov; Anat Krauskopf; Martin Kupiec
Journal:  Curr Genet       Date:  2004-11-18       Impact factor: 3.886

Review 6.  Two retrotransposons maintain telomeres in Drosophila.

Authors:  M-L Pardue; S Rashkova; E Casacuberta; P G DeBaryshe; J A George; K L Traverse
Journal:  Chromosome Res       Date:  2005       Impact factor: 5.239

Review 7.  The central roles of telomeres and subtelomeres in antigenic variation in African trypanosomes.

Authors:  David Horn; J David Barry
Journal:  Chromosome Res       Date:  2005       Impact factor: 5.239

Review 8.  Redundancy or specificity? The role of the CDK Pho85 in cell cycle control.

Authors:  Javier Jiménez; Natalia Ricco; Carmen Grijota-Martínez; Rut Fadó; Josep Clotet
Journal:  Int J Biochem Mol Biol       Date:  2013-09-13

9.  Rif1 phosphorylation site analysis in telomere length regulation and the response to damaged telomeres.

Authors:  Jinyu Wang; Haitao Zhang; Mohammed Al Shibar; Belinda Willard; Alo Ray; Kurt W Runge
Journal:  DNA Repair (Amst)       Date:  2018-03-07

10.  A role for the nucleoporin Nup170p in chromatin structure and gene silencing.

Authors:  David W Van de Vosse; Yakun Wan; Diego L Lapetina; Wei-Ming Chen; Jung-Hsien Chiang; John D Aitchison; Richard W Wozniak
Journal:  Cell       Date:  2013-02-28       Impact factor: 41.582

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