Literature DB >> 15159578

Crystallization of CcdB in complex with a GyrA fragment.

Minh Hoa Dao-Thi1, Laurence Van Melderen, Erwin De Genst, Lieven Buts, An Ranquin, Lode Wyns, Remy Loris.   

Abstract

Plasmid addiction systems consist of a plasmid-encoded toxin-antidote pair that serves to stabilize low-copy-number plasmids in bacterial populations. CcdB, the toxin from the ccd system on the Escherichia coli F plasmid, acts as a gyrase poison. A 14 kDa fragment of gyrase, GyrA14, was found to bind to the toxin CcdB with an affinity of 1.75 x 10(-8) M. Crystals of the (GyrA14)(2) dimer in its free state belong to space group P4(3)2(1)2, with unit-cell parameters a = 86.4, c = 89.4 angstroms, and diffract to 2.4 angstroms. Crystals of the (GyrA14)(2)-(CcdB)(2) complex belong to space group P2(1)2(1)2(1), with a = 52.1, b = 83.3, c = 110.9 angstroms, and diffract to 2.8 angstroms resolution. Copyright 2004 International Union of Crystallography

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15159578     DOI: 10.1107/S0907444904007814

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  11 in total

1.  Crystal structures of Phd-Doc, HigA, and YeeU establish multiple evolutionary links between microbial growth-regulating toxin-antitoxin systems.

Authors:  Mark A Arbing; Samuel K Handelman; Alexandre P Kuzin; Grégory Verdon; Chi Wang; Min Su; Francesca P Rothenbacher; Mariam Abashidze; Mohan Liu; Jennifer M Hurley; Rong Xiao; Thomas Acton; Masayori Inouye; Gaetano T Montelione; Nancy A Woychik; John F Hunt
Journal:  Structure       Date:  2010-08-11       Impact factor: 5.006

2.  Molecular cloning of apicoplast-targeted Plasmodium falciparum DNA gyrase genes: unique intrinsic ATPase activity and ATP-independent dimerization of PfGyrB subunit.

Authors:  Mohd Ashraf Dar; Atul Sharma; Neelima Mondal; Suman Kumar Dhar
Journal:  Eukaryot Cell       Date:  2007-01-12

3.  Driving forces of gyrase recognition by the addiction toxin CcdB.

Authors:  Mario Simic; Natalie De Jonge; Remy Loris; Gorazd Vesnaver; Jurij Lah
Journal:  J Biol Chem       Date:  2009-05-22       Impact factor: 5.157

4.  Molecular mechanism governing ratio-dependent transcription regulation in the ccdAB operon.

Authors:  Alexandra Vandervelde; Igor Drobnak; San Hadži; Yann G-J Sterckx; Thomas Welte; Henri De Greve; Daniel Charlier; Rouslan Efremov; Remy Loris; Jurij Lah
Journal:  Nucleic Acids Res       Date:  2017-04-07       Impact factor: 16.971

5.  Purification and crystallization of Vibrio fischeri CcdB and its complexes with fragments of gyrase and CcdA.

Authors:  Natalie De Jonge; Lieven Buts; Joris Vangelooven; Natacha Mine; Laurence Van Melderen; Lode Wyns; Remy Loris
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-03-30

6.  The structure and function of Mycobacterium tuberculosis MazF-mt6 toxin provide insights into conserved features of MazF endonucleases.

Authors:  Eric D Hoffer; Stacey J Miles; Christine M Dunham
Journal:  J Biol Chem       Date:  2017-03-15       Impact factor: 5.157

7.  Vibrio cholerae ParE2 poisons DNA gyrase via a mechanism distinct from other gyrase inhibitors.

Authors:  Jie Yuan; Yann Sterckx; Lesley A Mitchenall; Anthony Maxwell; Remy Loris; Matthew K Waldor
Journal:  J Biol Chem       Date:  2010-10-15       Impact factor: 5.157

8.  Molecular details of quinolone-DNA interactions: solution structure of an unusually stable DNA duplex with covalently linked nalidixic acid residues and non-covalent complexes derived from it.

Authors:  Karsten Siegmund; Shruti Maheshwary; Sukunath Narayanan; William Connors; Matthias Riedrich; Michael Printz; Clemens Richert
Journal:  Nucleic Acids Res       Date:  2005-08-26       Impact factor: 16.971

9.  Diverse distribution of Toxin-Antitoxin II systems in Salmonella enterica serovars.

Authors:  Andrea Di Cesare; Carmen Losasso; Lisa Barco; Ester M Eckert; Daniele Conficoni; Giulia Sarasini; Gianluca Corno; Antonia Ricci
Journal:  Sci Rep       Date:  2016-06-30       Impact factor: 4.379

10.  Expression of different ParE toxins results in conserved phenotypes with distinguishable classes of toxicity.

Authors:  Jessica R Ames; Meenakumari Muthuramalingam; Tamiko Murphy; Fares Z Najar; Christina R Bourne
Journal:  Microbiologyopen       Date:  2019-07-16       Impact factor: 3.139

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.