Literature DB >> 15158054

Rejoinder: whole-culture synchronization cannot, and does not, synchronize cells.

Stephen Cooper1.   

Abstract

There have been numerous proposals suggesting that whole-culture methods - in which all cells in a growing culture are treated identically - can synchronize cells. An explicit defense of these methods has been presented (Spellman and Sherlock, this issue, pp. 270-273, ). Here, this defense of whole-culture 'synchronization' is subjected to a critical evaluation leading to the conclusion that whole-culture synchronization cannot synchronize cells - at all. Whole-culture methods cannot produce a set of cells that reflects the size and genome composition of cells of any particular cell-cycle age during the normal cell cycle. Thus, in addition to the well-recognized problem of artifacts, it is proposed that experiments using whole-culture treatments (usually starvation or inhibition methods) are not suitable for cell-cycle analysis because these methods do not produce a synchronized culture.

Mesh:

Year:  2004        PMID: 15158054     DOI: 10.1016/j.tibtech.2004.04.011

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  8 in total

1.  Replicating neuroblastoma cells in different cell cycle phases display different vulnerability to amyloid toxicity.

Authors:  Cristina Cecchi; Anna Pensalfini; Massimo Stefani; Serena Baglioni; Claudia Fiorillo; Silvia Cappadona; Roberto Caporale; Daniele Nosi; Marco Ruggiero; Gianfranco Liguri
Journal:  J Mol Med (Berl)       Date:  2007-09-22       Impact factor: 4.599

2.  Identifying genes involved in cyclic processes by combining gene expression analysis and prior knowledge.

Authors:  Wentao Zhao; Erchin Serpedin; Edward R Dougherty
Journal:  EURASIP J Bioinform Syst Biol       Date:  2009-04-15

3.  Chromosome replication dynamics in the archaeon Sulfolobus acidocaldarius.

Authors:  Iain G Duggin; Simon A McCallum; Stephen D Bell
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-15       Impact factor: 11.205

4.  Mapping Metabolic Events in the Cancer Cell Cycle Reveals Arginine Catabolism in the Committed SG2M Phase.

Authors:  Irena Roci; Jeramie D Watrous; Kim A Lagerborg; Lorenzo Lafranchi; Arne Lindqvist; Mohit Jain; Roland Nilsson
Journal:  Cell Rep       Date:  2019-02-12       Impact factor: 9.423

5.  Thymidine block does not synchronize L1210 mouse leukaemic cells: implications for cell cycle control, cell cycle analysis and whole-culture synchronization.

Authors:  S Cooper; K Z Chen; S Ravi
Journal:  Cell Prolif       Date:  2008-02       Impact factor: 6.831

6.  Cell-cycle synchronisation of bloodstream forms of Trypanosoma brucei using Vybrant DyeCycle Violet-based sorting.

Authors:  Sarah Kabani; Martin Waterfall; Keith R Matthews
Journal:  Mol Biochem Parasitol       Date:  2009-09-01       Impact factor: 1.759

7.  Oscillatory dynamics of cell cycle proteins in single yeast cells analyzed by imaging cytometry.

Authors:  David A Ball; Julie Marchand; Magaly Poulet; William T Baumann; Katherine C Chen; John J Tyson; Jean Peccoud
Journal:  PLoS One       Date:  2011-10-26       Impact factor: 3.240

8.  Comment on and reply to "Analysis of variation of amplitudes in cell cycle gene expression" by Liu, Gaido and Wolfinger: on the analysis of gene expression during the normal, eukaryotic, cell cycle.

Authors:  Stephen Cooper
Journal:  Theor Biol Med Model       Date:  2005-11-18       Impact factor: 2.432

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.