Literature DB >> 15154743

Structure Elucidator: a versatile expert system for molecular structure elucidation from 1D and 2D NMR data and molecular fragments.

Mikhail E Elyashberg1, Kirill A Blinov, Antony J Williams, Sergey G Molodtsov, Gary E Martin, Eduard R Martirosian.   

Abstract

StrucEluc is an expert system that allows the computer-assisted elucidation of chemical structures based on the inputs of a series of spectral data including 1D and 2D NMR and mass spectra. The system has been enabled to allow a chemist to utilize fragments stored in a fragment database as well as user-defined fragments submitted by the chemist in the structure elucidation process. The association of fragments in this way has been shown to dramatically speed up the process of structure generation from 2D NMR data and has helped to minimize or eliminate the need for user intervention thereby further enabling the vision of automated elucidation. The use of fragments has frequently transformed very difficult 2D NMR elucidation challenges into easily solvable tasks. A strategy to utilize molecular fragments has been developed and optimized based on specific challenging examples. This strategy will be described here using real world examples. Experience gained by solving more than 150 structure elucidation problems from a variety of literature sources is also reviewed in this work.

Entities:  

Year:  2004        PMID: 15154743     DOI: 10.1021/ci0341060

Source DB:  PubMed          Journal:  J Chem Inf Comput Sci        ISSN: 0095-2338


  9 in total

1.  An efficient computer-aided structural elucidation strategy for mixtures using an iterative dynamic programming algorithm.

Authors:  Bo-Han Su; Meng-Yu Shen; Yeu-Chern Harn; San-Yuan Wang; Alioune Schurz; Chieh Lin; Olivia A Lin; Yufeng J Tseng
Journal:  J Cheminform       Date:  2017-11-15       Impact factor: 5.514

2.  Blind trials of computer-assisted structure elucidation software.

Authors:  Arvin Moser; Mikhail E Elyashberg; Antony J Williams; Kirill A Blinov; Joseph C Dimartino
Journal:  J Cheminform       Date:  2012-02-09       Impact factor: 5.514

3.  Computer-assisted methods for molecular structure elucidation: realizing a spectroscopist's dream.

Authors:  Mikhail Elyashberg; Kirill Blinov; Sergey Molodtsov; Yegor Smurnyy; Antony J Williams; Tatiana Churanova
Journal:  J Cheminform       Date:  2009-03-17       Impact factor: 5.514

Review 4.  Malabaricane and Isomalabaricane Triterpenoids, Including Their Glycoconjugated Forms.

Authors:  Valentin A Stonik; Sophia A Kolesnikova
Journal:  Mar Drugs       Date:  2021-06-05       Impact factor: 5.118

5.  Seven Golden Rules for heuristic filtering of molecular formulas obtained by accurate mass spectrometry.

Authors:  Tobias Kind; Oliver Fiehn
Journal:  BMC Bioinformatics       Date:  2007-03-27       Impact factor: 3.169

6.  G.A.M.E.: GPU-accelerated mixture elucidator.

Authors:  Alioune Schurz; Bo-Han Su; Yi-Shu Tu; Tony Tsung-Yu Lu; Olivia A Lin; Yufeng J Tseng
Journal:  J Cheminform       Date:  2017-09-15       Impact factor: 5.514

7.  InChIKey collision resistance: an experimental testing.

Authors:  Igor Pletnev; Andrey Erin; Alan McNaught; Kirill Blinov; Dmitrii Tchekhovskoi; Steve Heller
Journal:  J Cheminform       Date:  2012-12-20       Impact factor: 5.514

Review 8.  Computational Methodologies in the Exploration of Marine Natural Product Leads.

Authors:  Florbela Pereira; Joao Aires-de-Sousa
Journal:  Mar Drugs       Date:  2018-07-13       Impact factor: 5.118

9.  Sampling CASE Application for the Quality Control of Published Natural Product Structures.

Authors:  Lorena Martins Guimarães Moreira; Jochen Junker
Journal:  Molecules       Date:  2021-12-13       Impact factor: 4.411

  9 in total

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