Literature DB >> 15146297

Early expression of two TdT isoforms in the hematopoietic system of the Mexican axolotl. Implications for the evolutionary origin of the N-nucleotide addition.

Rachel Golub1, Sébastien André, Alexandre Hassanin, Pierre Affaticati, Mani Larijani, Julien S Fellah.   

Abstract

Nontemplate (N)-nucleotide addition by the terminal dideoxynucleotidyl transferase (TdT) at the junctions of rearranging V( D) J gene segments greatly contribute to antigen-receptor diversity. TdT has been identified in several vertebrate species, where it is highly conserved. We report here the isolation of two forms of TdT mRNA in an amphibian, the Mexican axolotl. The isoform TdT1 shares all of the conserved structural motifs required for TdT activity and displays an average of 50-58% similarity at the amino acid level with TdT of other species. The second axolotl TdT variant ( TdT2) differs from TdT1 by a 57-amino acid deletion located between amino acids 165-222 of TdT1, including the first helix-hairpin-helix DNA-binding motif. During ontogeny, TdT products are first detected in the head of 6-week-old larvae and further in the head and trunk of 8-month-old larvae. These developmental stages correspond to the first detection of RAG1 and antigen-receptor (TCRbeta and IgHmicro) products in axolotl larvae. Our results suggest that in contrast to mammalian development, N diversity occurs early in axolotl development to diversify the primary repertoire. Phylogenetic analyses reveal that TdT and DNA polymerase mu(Pol mu) genes are closely related, and that both enzymes were already present in the common ancestor of jawed vertebrates.

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Year:  2004        PMID: 15146297     DOI: 10.1007/s00251-004-0681-2

Source DB:  PubMed          Journal:  Immunogenetics        ISSN: 0093-7711            Impact factor:   2.846


  42 in total

1.  The 'evolutionary signal' of homoplasy in protein-coding gene sequences and its consequences for a priori weighting in phylogeny.

Authors:  A Hassanin; G Lecointre; S Tillier
Journal:  C R Acad Sci III       Date:  1998-07

2.  Distinct and opposite diversifying activities of terminal transferase splice variants.

Authors:  To-Ha Thai; Mary M Purugganan; David B Roth; John F Kearney
Journal:  Nat Immunol       Date:  2002-04-08       Impact factor: 25.606

3.  Structure and diversity of the heavy chain VDJ junctions in the developing Mexican axolotl.

Authors:  R Golub; J S Fellah; J Charlemagne
Journal:  Immunogenetics       Date:  1997       Impact factor: 2.846

4.  Crystal structures of a template-independent DNA polymerase: murine terminal deoxynucleotidyltransferase.

Authors:  M Delarue; J B Boulé; J Lescar; N Expert-Bezançon; N Jourdan; N Sukumar; F Rougeon; C Papanicolaou
Journal:  EMBO J       Date:  2002-02-01       Impact factor: 11.598

5.  DNA polymerase mu (Pol mu), homologous to TdT, could act as a DNA mutator in eukaryotic cells.

Authors:  O Domínguez; J F Ruiz; T Laín de Lera; M García-Díaz; M A González; T Kirchhoff; C Martínez-A; A Bernad; L Blanco
Journal:  EMBO J       Date:  2000-04-03       Impact factor: 11.598

6.  The V(D)J recombination activating gene, RAG-1.

Authors:  D G Schatz; M A Oettinger; D Baltimore
Journal:  Cell       Date:  1989-12-22       Impact factor: 41.582

7.  Complex expression patterns of lymphocyte-specific genes during the development of cartilaginous fish implicate unique lymphoid tissues in generating an immune repertoire.

Authors:  A L Miracle; M K Anderson; R T Litman; C J Walsh; C A Luer; E V Rothenberg; G W Litman
Journal:  Int Immunol       Date:  2001-04       Impact factor: 4.823

8.  T-cell specific avian TdT: characterization of the cDNA and recombinant enzyme.

Authors:  B Yang; K N Gathy; M S Coleman
Journal:  Nucleic Acids Res       Date:  1995-06-11       Impact factor: 16.971

9.  Isolation and characterization of the Xenopus terminal deoxynucleotidyl transferase.

Authors:  A Lee; E Hsu
Journal:  J Immunol       Date:  1994-05-01       Impact factor: 5.422

10.  The long isoform of terminal deoxynucleotidyl transferase enters the nucleus and, rather than catalyzing nontemplated nucleotide addition, modulates the catalytic activity of the short isoform.

Authors:  C L Benedict; S Gilfillan; J F Kearney
Journal:  J Exp Med       Date:  2001-01-01       Impact factor: 14.307

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  6 in total

Review 1.  Evolution of B cell immunity.

Authors:  David Parra; Fumio Takizawa; J Oriol Sunyer
Journal:  Annu Rev Anim Biosci       Date:  2013-01       Impact factor: 8.923

2.  Mapping hematopoiesis in a fully regenerative vertebrate: the axolotl.

Authors:  David Lopez; Li Lin; James R Monaghan; Christopher R Cogle; Frank J Bova; Malcolm Maden; Edward W Scott
Journal:  Blood       Date:  2014-05-06       Impact factor: 22.113

Review 3.  Amphibian macrophage development and antiviral defenses.

Authors:  Leon Grayfer; Jacques Robert
Journal:  Dev Comp Immunol       Date:  2015-12-15       Impact factor: 3.636

Review 4.  Immunity in salamander regeneration: Where are we standing and where are we headed?

Authors:  Lizbeth Airais Bolaños-Castro; Hannah Elisabeth Walters; Rubén Octavio García Vázquez; Maximina Hee Yun
Journal:  Dev Dyn       Date:  2020-09-21       Impact factor: 2.842

5.  Characterization of terminal deoxynucleotidyl transferase and polymerase mu in zebrafish.

Authors:  Susann Beetz; Dagmar Diekhoff; Lisa A Steiner
Journal:  Immunogenetics       Date:  2007-08-14       Impact factor: 3.330

6.  Identification of the Adult Hematopoietic Liver as the Primary Reservoir for the Recruitment of Pro-regenerative Macrophages Required for Salamander Limb Regeneration.

Authors:  Ryan J Debuque; Andrew J Hart; Gabriela H Johnson; Nadia A Rosenthal; James W Godwin
Journal:  Front Cell Dev Biol       Date:  2021-09-22
  6 in total

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