Literature DB >> 15136570

RNA editing generates tissue-specific sodium channels with distinct gating properties.

Weizhong Song1, Zhiqi Liu, Jianguo Tan, Yoshiko Nomura, Ke Dong.   

Abstract

Sodium channels play an essential role in generating the action potential in eukaryotic cells, and their transcripts, especially those in insects, undergo extensive A-to-I RNA editing. The functional consequences of RNA editing of sodium channel transcripts, however, have yet to be determined. We characterized 20 splice variants of the German cockroach sodium channel gene BgNa(v). Functional analysis revealed that these variants exhibited a broad range of voltage-dependent activation and inactivation. Further analysis of two variants, BgNa(v)1-1 and BgNa(v)1-2, which activate at more depolarizing membrane potentials than other variants, showed that RNA editing events were responsible for variant-specific gating properties. Two U-to-C editing sites identified in BgNa(v)1-1 resulted in a Leu to Pro change in segment 1 of domain III (IIIS1) and a Val to Ala change in IVS4. The Leu to Pro change shifted both the voltage dependence of activation and steady-state inactivation in the depolarizing direction. Two A-to-I editing events in BgNa(v)1-2 resulted in a Lys to Arg change in IS2 and an Ile to Met change in IVS3. The Lys to Arg change shifted the voltage dependence of activation in the depolarizing direction. Moreover, these RNA editing events occurred in a tissue-specific and development-specific manner. Our findings provide direct evidence that RNA editing is an important mechanism generating tissue-/cell type-specific functional variants of sodium channels.

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Year:  2004        PMID: 15136570      PMCID: PMC3066004          DOI: 10.1074/jbc.M402392200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  46 in total

1.  Nomenclature of voltage-gated sodium channels.

Authors:  A L Goldin; R L Barchi; J H Caldwell; F Hofmann; J R Howe; J C Hunter; R G Kallen; G Mandel; M H Meisler; Y B Netter; M Noda; M M Tamkun; S G Waxman; J N Wood; W A Catterall
Journal:  Neuron       Date:  2000-11       Impact factor: 17.173

2.  A putative RNA editing from U to C in a mouse mitochondrial transcript.

Authors:  Jaime Villegas; Ilse Müller; Jacob Arredondo; Rodrigo Pinto; Luis O Burzio
Journal:  Nucleic Acids Res       Date:  2002-05-01       Impact factor: 16.971

3.  Extensive editing of mRNAs for the squid delayed rectifier K+ channel regulates subunit tetramerization.

Authors:  Joshua J C Rosenthal; Francisco Bezanilla
Journal:  Neuron       Date:  2002-05-30       Impact factor: 17.173

Review 4.  A-to-I editing: new and old sites, functions and speculations.

Authors:  Peter H Seeburg
Journal:  Neuron       Date:  2002-07-03       Impact factor: 17.173

5.  Developmental regulation of alternative exon usage in the house fly Vssc1 sodium channel gene.

Authors:  Si Hyeock Lee; Patricia J Ingles; Douglas C Knipple; David M Soderlund
Journal:  Invert Neurosci       Date:  2001-11-10

Review 6.  Resurgence of sodium channel research.

Authors:  A L Goldin
Journal:  Annu Rev Physiol       Date:  2001       Impact factor: 19.318

Review 7.  NaN/Nav1.9: a sodium channel with unique properties.

Authors:  Sulayman Dib-Hajj; Joel A Black; Theodore R Cummins; Stephen G Waxman
Journal:  Trends Neurosci       Date:  2002-05       Impact factor: 13.837

8.  Alternative splicing of an insect sodium channel gene generates pharmacologically distinct sodium channels.

Authors:  Jianguo Tan; Zhiqi Liu; Yoshiko Nomura; Alan L Goldin; Ke Dong
Journal:  J Neurosci       Date:  2002-07-01       Impact factor: 6.167

9.  Novel putative nicotinic acetylcholine receptor subunit genes, Dalpha5, Dalpha6 and Dalpha7, in Drosophila melanogaster identify a new and highly conserved target of adenosine deaminase acting on RNA-mediated A-to-I pre-mRNA editing.

Authors:  M Grauso; R A Reenan; E Culetto; D B Sattelle
Journal:  Genetics       Date:  2002-04       Impact factor: 4.562

Review 10.  Overview of the voltage-gated sodium channel family.

Authors:  Frank H Yu; William A Catterall
Journal:  Genome Biol       Date:  2003-02-24       Impact factor: 13.583

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  44 in total

1.  RNA editing of the IQ domain in Ca(v)1.3 channels modulates their Ca²⁺-dependent inactivation.

Authors:  Hua Huang; Bao Zhen Tan; Yiru Shen; Jin Tao; Fengli Jiang; Ying Ying Sung; Choon Keow Ng; Manfred Raida; Georg Köhr; Miyoko Higuchi; Hadi Fatemi-Shariatpanahi; Bradley Harden; David T Yue; Tuck Wah Soong
Journal:  Neuron       Date:  2012-01-26       Impact factor: 17.173

Review 2.  Insect sodium channels and insecticide resistance.

Authors:  Ke Dong
Journal:  Invert Neurosci       Date:  2007-01-06

3.  Molecular basis of differential sensitivity of insect sodium channels to DCJW, a bioactive metabolite of the oxadiazine insecticide indoxacarb.

Authors:  Weizhong Song; Zhiqi Liu; Ke Dong
Journal:  Neurotoxicology       Date:  2005-12-02       Impact factor: 4.294

4.  Identification of new batrachotoxin-sensing residues in segment IIIS6 of the sodium channel.

Authors:  Yuzhe Du; Daniel P Garden; Lingxin Wang; Boris S Zhorov; Ke Dong
Journal:  J Biol Chem       Date:  2011-02-08       Impact factor: 5.157

5.  Analysis and design of RNA sequencing experiments for identifying RNA editing and other single-nucleotide variants.

Authors:  Jae-Hyung Lee; Jason K Ang; Xinshu Xiao
Journal:  RNA       Date:  2013-04-18       Impact factor: 4.942

6.  Molecular characterization and functional expression of the DSC1 channel.

Authors:  Tianxiang Zhang; Zhiqi Liu; Weizhong Song; Yuzhe Du; Ke Dong
Journal:  Insect Biochem Mol Biol       Date:  2011-05-07       Impact factor: 4.714

7.  Voltage-Gated Sodium Channels as Insecticide Targets.

Authors:  Kristopher S Silver; Yuzhe Du; Yoshiko Nomura; Eugenio E Oliveira; Vincent L Salgado; Boris S Zhorov; Ke Dong
Journal:  Adv In Insect Phys       Date:  2014       Impact factor: 3.364

8.  Role of the sixth transmembrane segment of domain IV of the cockroach sodium channel in the action of sodium channel blocker insecticides.

Authors:  Kristopher S Silver; Yoshiko Nomura; Vincent L Salgado; Ke Dong
Journal:  Neurotoxicology       Date:  2009-04-08       Impact factor: 4.294

9.  Alternative splicing in the voltage-gated sodium channel DmNav regulates activation, inactivation, and persistent current.

Authors:  Wei-Hsiang Lin; Duncan E Wright; Nara I Muraro; Richard A Baines
Journal:  J Neurophysiol       Date:  2009-07-22       Impact factor: 2.714

Review 10.  Use of non-mammalian alternative models for neurotoxicological study.

Authors:  Randall T Peterson; Richard Nass; Windy A Boyd; Jonathan H Freedman; Ke Dong; Toshio Narahashi
Journal:  Neurotoxicology       Date:  2008-04-25       Impact factor: 4.294

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