Literature DB >> 15135733

On the role of proofreading exonuclease in bypass of a 1,2 d(GpG) cisplatin adduct by the herpes simplex virus-1 DNA polymerase.

Mercedes E Arana1, Liping Song, Nicolas Tanguy Le Gac, Deborah S Parris, Giuseppe Villani, Paul E Boehmer.   

Abstract

UL30, the herpes simplex virus type-1 DNA polymerase, stalls at the base preceding a cisplatin crosslinked 1,2 d(GpG) dinucleotide and engages in a futile cycle of incorporation and excision by virtue of its 3'-5' exonuclease. Therefore, we examined the translesion synthesis (TLS) potential of an exonuclease-deficient UL30 (UL30D368A). We found that UL30D368A did not perform complete translesion synthesis but incorporated one nucleotide opposite the first base of the adduct. This addition was affected by the propensity of the enzyme to dissociate from the damaged template. Consequently, addition of the polymerase processivity factor, UL42, increased nucleotide incorporation opposite the lesion. The addition of Mn(2+), which was previously shown to support translesion synthesis by wild-type UL30, also enabled limited bypass of the adduct by UL30D368A. We show that the primer terminus opposite the crosslinked d(GpG) dinucleotide and at least three bases downstream of the lesion is unpaired and not extended by the enzyme. These data indicate that the primer terminus opposite the lesion may be sequestered into the exonuclease site of the enzyme. Consequently, elimination of exonuclease activity alone, without disrupting binding, is insufficient to permit bypass of a bulky lesion by this enzyme.

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Year:  2004        PMID: 15135733     DOI: 10.1016/j.dnarep.2004.02.006

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  6 in total

1.  Contributions of nucleotide excision repair, DNA polymerase eta, and homologous recombination to replication of UV-irradiated herpes simplex virus type 1.

Authors:  Isabella Muylaert; Per Elias
Journal:  J Biol Chem       Date:  2010-03-09       Impact factor: 5.157

2.  Association between the herpes simplex virus-1 DNA polymerase and uracil DNA glycosylase.

Authors:  Federica Bogani; Ilsa Corredeira; Virneliz Fernandez; Ulrike Sattler; Wiriya Rutvisuttinunt; Martine Defais; Paul E Boehmer
Journal:  J Biol Chem       Date:  2010-07-02       Impact factor: 5.157

3.  Mechanisms by which herpes simplex virus DNA polymerase limits translesion synthesis through abasic sites.

Authors:  Yali Zhu; Liping Song; Jason Stroud; Deborah S Parris
Journal:  DNA Repair (Amst)       Date:  2007-09-27

4.  Kinetic approaches to understanding the mechanisms of fidelity of the herpes simplex virus type 1 DNA polymerase.

Authors:  Yali Zhu; Jason Stroud; Liping Song; Deborah S Parris
Journal:  J Nucleic Acids       Date:  2010-12-13

5.  Initiation of new DNA strands by the herpes simplex virus-1 primase-helicase complex and either herpes DNA polymerase or human DNA polymerase alpha.

Authors:  Nisha A Cavanaugh; Robert D Kuchta
Journal:  J Biol Chem       Date:  2008-11-20       Impact factor: 5.157

6.  Translesion DNA Synthesis Across Lesions Induced by Oxidative Products of Pyrimidines: An Insight into the Mechanism by Microscale Thermophoresis.

Authors:  Ondrej Hrabina; Viktor Brabec; Olga Novakova
Journal:  Int J Mol Sci       Date:  2019-10-10       Impact factor: 5.923

  6 in total

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