Literature DB >> 15130837

Artificial intelligence techniques for bioinformatics.

Ajit Narayanan1, Edward C Keedwell, Björn Olsson.   

Abstract

This review provides an overview of the ways in which techniques from artificial intelligence (AI) can be usefully employed in bioinformatics, both for modelling biological data and for making new discoveries. The paper covers three techniques: symbolic machine learning approaches (nearest neighbour and identification tree techniques), artificial neural networks and genetic algorithms. Each technique is introduced and supported with examples taken from the bioinformatics literature. These examples include folding prediction, viral protease cleavage prediction, classification, multiple sequence alignment and microarray gene expression analysis.

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Year:  2002        PMID: 15130837

Source DB:  PubMed          Journal:  Appl Bioinformatics        ISSN: 1175-5636


  4 in total

1.  Targeting c-Myc-activated genes with a correlation method: detection of global changes in large gene expression network dynamics.

Authors:  D Remondini; B O'Connell; N Intrator; J M Sedivy; N Neretti; G C Castellani; L N Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-02       Impact factor: 11.205

2.  Visualization of microarray gene expression data.

Authors:  Tangirala Venkateswara Prasad; Syed Ismail Ahson
Journal:  Bioinformation       Date:  2006-05-03

3.  Fuzzy association rules for biological data analysis: a case study on yeast.

Authors:  Francisco J Lopez; Armando Blanco; Fernando Garcia; Carlos Cano; Antonio Marin
Journal:  BMC Bioinformatics       Date:  2008-02-19       Impact factor: 3.169

4.  A comparative study of different machine learning methods on microarray gene expression data.

Authors:  Mehdi Pirooznia; Jack Y Yang; Mary Qu Yang; Youping Deng
Journal:  BMC Genomics       Date:  2008       Impact factor: 3.969

  4 in total

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