Literature DB >> 15130825

Gene duplication, the evolution of novel gene functions, and detecting functional divergence of duplicates in silico.

Jeroen Raes1, Yves Van de Peer.   

Abstract

Duplication of genes increases the amount of genetic material on which evolution can work and has been considered of major importance for the development of biological novelties or to explain important transitions that have occurred during biological evolution. Recently, much research has been devoted to the study of the evolutionary and functional divergence of duplicated genes. Since the majority of genes are part of gene families, there is considerable interest in predicting differences in function between duplicates and assessing the functional redundancy of genes within gene families. In this review, we discuss the strengths and limitations of both older and novel approaches to investigate the evolution of duplicated genes in silico.

Mesh:

Year:  2003        PMID: 15130825

Source DB:  PubMed          Journal:  Appl Bioinformatics        ISSN: 1175-5636


  20 in total

1.  Divergence of duplicate genes in exon-intron structure.

Authors:  Guixia Xu; Chunce Guo; Hongyan Shan; Hongzhi Kong
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-09       Impact factor: 11.205

Review 2.  Genetic variation in Chlamydia trachomatis and their hosts: impact on disease severity and tissue tropism.

Authors:  Hossam Abdelsamed; Jan Peters; Gerald I Byrne
Journal:  Future Microbiol       Date:  2013-09       Impact factor: 3.165

3.  Following tetraploidy in an Arabidopsis ancestor, genes were removed preferentially from one homeolog leaving clusters enriched in dose-sensitive genes.

Authors:  Brian C Thomas; Brent Pedersen; Michael Freeling
Journal:  Genome Res       Date:  2006-06-07       Impact factor: 9.043

4.  G-boxes, bigfoot genes, and environmental response: characterization of intragenomic conserved noncoding sequences in Arabidopsis.

Authors:  Michael Freeling; Lakshmi Rapaka; Eric Lyons; Brent Pedersen; Brian C Thomas
Journal:  Plant Cell       Date:  2007-05-11       Impact factor: 11.277

5.  Evolution of the Aux/IAA Gene Family in Hexaploid Wheat.

Authors:  Linyi Qiao; Li Zhang; Xiaojun Zhang; Lei Zhang; Xin Li; Jianzhong Chang; Haixian Zhan; Huijuan Guo; Jun Zheng; Zhijian Chang
Journal:  J Mol Evol       Date:  2017-10-30       Impact factor: 2.395

6.  Molecular evolution and functional divergence of X-intrinsic protein genes in plants.

Authors:  Jelli Venkatesh; Jae-Woong Yu; Daniel Gaston; Se Won Park
Journal:  Mol Genet Genomics       Date:  2014-10-05       Impact factor: 3.291

7.  Identification and characterization of two closely related histone H4 arginine 3 methyltransferases in Arabidopsis thaliana.

Authors:  Dongsheng Yan; Yong Zhang; Lifang Niu; Yi Yuan; Xiaofeng Cao
Journal:  Biochem J       Date:  2007-11-15       Impact factor: 3.857

8.  To investigate protein evolution by detecting suppressed epitope structures.

Authors:  Stephen M Chong; J-P Jin
Journal:  J Mol Evol       Date:  2009-04-14       Impact factor: 2.395

9.  Distinct enhancers at the Pax3 locus can function redundantly to regulate neural tube and neural crest expressions.

Authors:  Karl R Degenhardt; Rita C Milewski; Arun Padmanabhan; Mayumi Miller; Manvendra K Singh; Deborah Lang; Kurt A Engleka; Meilin Wu; Jun Li; Diane Zhou; Nicole Antonucci; Li Li; Jonathan A Epstein
Journal:  Dev Biol       Date:  2010-01-04       Impact factor: 3.582

10.  Evolution by leaps: gene duplication in bacteria.

Authors:  Margrethe H Serres; Alastair R W Kerr; Thomas J McCormack; Monica Riley
Journal:  Biol Direct       Date:  2009-11-23       Impact factor: 4.540

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.