Literature DB >> 15128547

New method of denitrification analysis of bradyrhizobium field isolates by gas chromatographic determination of (15)N-labeled N(2).

Reiko Sameshima-Saito1, Kaori Chiba, Kiwamu Minamisawa.   

Abstract

To evaluate the denitrification abilities of many Bradyrhizobium field isolates, we developed a new (15)N-labeled N(2) detection methodology, which is free from interference from atmospheric N(2) contamination. (30)N(2) ((15)N(15)N) and (29)N(2) ((15)N(14)N) were detected as an apparent peak by a gas chromatograph equipped with a thermal conductivity detector with N(2) gas having natural abundance of (15)N (0.366 atom%) as a carrier gas. The detection limit was 0.04% (30)N(2), and the linearity extended at least to 40% (30)N(2). When Bradyrhizobium japonicum USDA110 was grown in cultures anaerobically with (15)NO(3)(-), denitrification product ((30)N(2)) was detected stoichiometrically. A total of 65 isolates of soybean bradyrhizobia from two field sites in Japan were assayed by this method. The denitrification abilities were partly correlated with filed sites, Bradyrhizobium species, and the hup genotype.

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Year:  2004        PMID: 15128547      PMCID: PMC404451          DOI: 10.1128/AEM.70.5.2886-2891.2004

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  19 in total

1.  Prediction of thermal conductivity detection response factors using an artificial neural network.

Authors:  M Jalali-Heravi; M H Fatemi
Journal:  J Chromatogr A       Date:  2000-11-03       Impact factor: 4.759

Review 2.  Measurement of denitrification in sediments with the 15N isotope pairing technique.

Authors:  S M Steingruber; J Friedrich; R Gächter; B Wehrli
Journal:  Appl Environ Microbiol       Date:  2001-09       Impact factor: 4.792

3.  Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110.

Authors:  Takakazu Kaneko; Yasukazu Nakamura; Shusei Sato; Kiwamu Minamisawa; Toshiki Uchiumi; Shigemi Sasamoto; Akiko Watanabe; Kumi Idesawa; Mayumi Iriguchi; Kumiko Kawashima; Mitsuyo Kohara; Midori Matsumoto; Sayaka Shimpo; Hisae Tsuruoka; Tsuyuko Wada; Manabu Yamada; Satoshi Tabata
Journal:  DNA Res       Date:  2002-12-31       Impact factor: 4.458

4.  Effect of the carrier gas on the sensitivity of a thermal conductivity detector in gas chromatography.

Authors:  N H RAY
Journal:  Nature       Date:  1958-12-13       Impact factor: 49.962

5.  New Bradyrhizobium japonicum strains that possess high copy numbers of the repeated sequence RS alpha.

Authors:  K Minamisawa; T Isawa; Y Nakatsuka; N Ichikawa
Journal:  Appl Environ Microbiol       Date:  1998-05       Impact factor: 4.792

6.  Acetylene inhibition of nitrous oxide reduction by denitrifying bacteria.

Authors:  T Yoshinari; R Knowles
Journal:  Biochem Biophys Res Commun       Date:  1976-04-05       Impact factor: 3.575

7.  IS1631 occurrence in Bradyrhizobium japonicum highly reiterated sequence-possessing strains with high copy numbers of repeated sequences RSalpha and RSbeta.

Authors:  T Isawa; R Sameshima; H Mitsui; K Minamisawa
Journal:  Appl Environ Microbiol       Date:  1999-08       Impact factor: 4.792

Review 8.  Cell biology and molecular basis of denitrification.

Authors:  W G Zumft
Journal:  Microbiol Mol Biol Rev       Date:  1997-12       Impact factor: 11.056

9.  Phylogeny and distribution of extra-slow-growing Bradyrhizobium japonicum harboring high copy numbers of RSalpha, RSbeta and IS1631.

Authors:  Reiko Sameshima; Tsuyoshi Isawa; Michael J Sadowsky; Tohru Hamada; Hiroaki Kasai; Arawan Shutsrirung; Hisayuki Mitsui; Kiwamu Minamisawa
Journal:  FEMS Microbiol Ecol       Date:  2003-05-01       Impact factor: 4.194

10.  Purification and characterization of nitrous oxide reductase from Pseudomonas aeruginosa strain P2.

Authors:  C K SooHoo; T C Hollocher
Journal:  J Biol Chem       Date:  1991-02-05       Impact factor: 5.157

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  8 in total

1.  Nitrate-dependent N₂O emission from intact soybean nodules via denitrification by Bradyrhizobium japonicum bacteroids.

Authors:  Junta Hirayama; Shima Eda; Hisayuki Mitsui; Kiwamu Minamisawa
Journal:  Appl Environ Microbiol       Date:  2011-10-14       Impact factor: 4.792

2.  Effect of Rj genotype and cultivation temperature on the community structure of soybean-nodulating bradyrhizobia.

Authors:  Sokichi Shiro; Akihiro Yamamoto; Yosuke Umehara; Masaki Hayashi; Naoto Yoshida; Aya Nishiwaki; Takeo Yamakawa; Yuichi Saeki
Journal:  Appl Environ Microbiol       Date:  2011-12-09       Impact factor: 4.792

3.  Symbiotic Bradyrhizobium japonicum reduces N2O surrounding the soybean root system via nitrous oxide reductase.

Authors:  Reiko Sameshima-Saito; Kaori Chiba; Junta Hirayama; Manabu Itakura; Hisayuki Mitsui; Shima Eda; Kiwamu Minamisawa
Journal:  Appl Environ Microbiol       Date:  2006-04       Impact factor: 4.792

4.  Generation of Bradyrhizobium japonicum mutants with increased N2O reductase activity by selection after introduction of a mutated dnaQ gene.

Authors:  Manabu Itakura; Kazufumi Tabata; Shima Eda; Hisayuki Mitsui; Kiriko Murakami; Junichi Yasuda; Kiwamu Minamisawa
Journal:  Appl Environ Microbiol       Date:  2008-10-10       Impact factor: 4.792

5.  An assessment of the diversity of culturable bacteria from main root of sugar beet.

Authors:  Kazuyuki Okazaki; Takao Iino; Yosuke Kuroda; Kazunori Taguchi; Hiroyuki Takahashi; Takuji Ohwada; Hiroto Tsurumaru; Takashi Okubo; Kiwamu Minamisawa; Seishi Ikeda
Journal:  Microbes Environ       Date:  2014-04-30       Impact factor: 2.912

6.  Identification of Genes Regulated by the Antitermination Factor NasT during Denitrification in Bradyrhizobium diazoefficiens.

Authors:  Cristina Sánchez; Arthur Fernandes Siqueira; Hisayuki Mitsui; Kiwamu Minamisawa
Journal:  Microbes Environ       Date:  2019-06-28       Impact factor: 2.912

7.  N(2)O emission from degraded soybean nodules depends on denitrification by Bradyrhizobium japonicum and other microbes in the rhizosphere.

Authors:  Shoko Inaba; Fumio Ikenishi; Manabu Itakura; Masakazu Kikuchi; Shima Eda; Naohiko Chiba; Chie Katsuyama; Yuichi Suwa; Hisayuki Mitsui; Kiwamu Minamisawa
Journal:  Microbes Environ       Date:  2012-10-05       Impact factor: 2.912

Review 8.  Nitrogen Cycling in Soybean Rhizosphere: Sources and Sinks of Nitrous Oxide (N2O).

Authors:  Cristina Sánchez; Kiwamu Minamisawa
Journal:  Front Microbiol       Date:  2019-08-21       Impact factor: 5.640

  8 in total

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