Literature DB >> 15124234

JC virus genotyping offers a new paradigm in the study of human populations.

Yoshiaki Yogo1, Chie Sugimoto, Huai-Ying Zheng, Hiroshi Ikegaya, Tomokazu Takasaka, Tadaichi Kitamura.   

Abstract

A small DNA virus, named JC virus (JCV) and belonging to the Polyomaviridae, is attracting the attention of anthropologists worldwide, as JCV genotyping appears to be a novel means of elucidating human migrations and the origins of various ethnic groups. The basic properties of JCV, the regional distributions of JCV genotypes, and the phylogenetic relationships among various JCV genotypes are described. Then, a study is described in which the origin of the modern Japanese was extensively investigated using the JCV genotyping method. Based on JCV genotypes in neighboring areas, the origins of people who carried JCV genotypes to the Japanese Archipelago are discussed. Finally, the relationships between JCV genotypes and Y-chromosome haplogroups are examined, as genetic variation on the Y chromosome has recently been examined in detail to investigate ancient human migrations and the population structures of human groups. Copyright 2004 John Wiley & Sons, Ltd.

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Year:  2004        PMID: 15124234     DOI: 10.1002/rmv.428

Source DB:  PubMed          Journal:  Rev Med Virol        ISSN: 1052-9276            Impact factor:   6.989


  11 in total

1.  Comparing phylogenetic codivergence between polyomaviruses and their hosts.

Authors:  Marcos Pérez-Losada; Ryan G Christensen; David A McClellan; Byron J Adams; Raphael P Viscidi; James C Demma; Keith A Crandall
Journal:  J Virol       Date:  2006-06       Impact factor: 5.103

2.  Evolution of BK virus based on complete genome data.

Authors:  Yuriko Nishimoto; Tomokazu Takasaka; Masami Hasegawa; Huai-Ying Zheng; Qin Chen; Chie Sugimoto; Tadaichi Kitamura; Yoshiaki Yogo
Journal:  J Mol Evol       Date:  2006-07-28       Impact factor: 2.395

3.  Merkel cell polyomavirus and two previously unknown polyomaviruses are chronically shed from human skin.

Authors:  Rachel M Schowalter; Diana V Pastrana; Katherine A Pumphrey; Adam L Moyer; Christopher B Buck
Journal:  Cell Host Microbe       Date:  2010-06-25       Impact factor: 21.023

4.  JC virus evolution and its association with human populations.

Authors:  Laura A Shackelton; Andrew Rambaut; Oliver G Pybus; Edward C Holmes
Journal:  J Virol       Date:  2006-10       Impact factor: 5.103

5.  Age-related urinary excretion of BK polyomavirus by nonimmunocompromised individuals.

Authors:  Shan Zhong; Huai-Ying Zheng; Motofumi Suzuki; Qin Chen; Hiroshi Ikegaya; Naoto Aoki; Shuzo Usuku; Nobuyoshi Kobayashi; Souichi Nukuzuma; Yukiharu Yasuda; Noboru Kuniyoshi; Yoshiaki Yogo; Tadaichi Kitamura
Journal:  J Clin Microbiol       Date:  2006-11-08       Impact factor: 5.948

6.  Molecular epidemiology of merkel cell polyomavirus: evidence for geographically related variant genotypes.

Authors:  Claire Martel-Jantin; Claudia Filippone; Patricia Tortevoye; Philippe V Afonso; Edouard Betsem; Stéphane Descorps-Declere; Jérôme T J Nicol; Antoine Touzé; Pierre Coursaget; Maryse Crouzat; Nicolas Berthet; Olivier Cassar; Antoine Gessain
Journal:  J Clin Microbiol       Date:  2014-02-12       Impact factor: 5.948

7.  Occurrence of the European subgroup of subtype I BK polyomavirus in Japanese-Americans suggests transmission outside the family.

Authors:  Yoshiaki Yogo; Shan Zhong; Makoto Suzuki; Ayako Shibuya; Tadaichi Kitamura
Journal:  J Virol       Date:  2007-09-12       Impact factor: 5.103

8.  An Asian origin for subtype IV BK virus based on phylogenetic analysis.

Authors:  Yuriko Nishimoto; Huai-Ying Zheng; Shan Zhong; Hiroshi Ikegaya; Qin Chen; Chie Sugimoto; Tadaichi Kitamura; Yoshiaki Yogo
Journal:  J Mol Evol       Date:  2007-06-25       Impact factor: 2.395

Review 9.  CC and CXC chemokines play key roles in the development of polyomaviruses related pathological conditions.

Authors:  Mohammad Hassan Mohammadi; Ashraf Kariminik
Journal:  Virol J       Date:  2021-06-03       Impact factor: 4.099

10.  Human JCV infections as a bio-anthropological marker of the formation of Brazilian Amazonian populations.

Authors:  Izaura M V Cayres-Vallinoto; Antonio C R Vallinoto; Vânia N Azevedo; Luis Fernando Almeida Machado; Marluísa de Oliveira Guimarães Ishak; Ricardo Ishak
Journal:  PLoS One       Date:  2012-10-12       Impact factor: 3.240

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