Literature DB >> 15122314

Alternative splice variant of actinin-4 in small cell lung cancer.

Kazufumi Honda1, Tesshi Yamada, Masahiro Seike, Yasuharu Hayashida, Masashi Idogawa, Tadashi Kondo, Yoshinori Ino, Setsuo Hirohashi.   

Abstract

Tumor-associated alternative RNA splicing has gained considerable attention. We identified a novel alternative splice variant RNA of actinin-4 in human small cell lung cancer (SCLC). Expression of the splice variant was highly specific to SCLC cell lines (10/10), biopsies (3/3), and testis. The variant encoded a peptide with a three amino-acid change in exon 8, where the germline missense mutation takes place in familial focal segmental glomerulosclerosis (FSGS). The variant protein showed high affinity to filamentous actin polymers and was not localized with cortical actin. Alternatively spliced actinin-4 may be a new diagnostic marker of SCLC and a candidate target for selective therapy.

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Year:  2004        PMID: 15122314     DOI: 10.1038/sj.onc.1207652

Source DB:  PubMed          Journal:  Oncogene        ISSN: 0950-9232            Impact factor:   9.867


  15 in total

1.  Functional implications of structural predictions for alternative splice proteins expressed in Her2/neu-induced breast cancers.

Authors:  Rajasree Menon; Ambrish Roy; Srayanta Mukherjee; Saveliy Belkin; Yang Zhang; Gilbert S Omenn
Journal:  J Proteome Res       Date:  2011-10-28       Impact factor: 4.466

2.  Structural characterization of the interactions between palladin and α-actinin.

Authors:  Moriah R Beck; Carol A Otey; Sharon L Campbell
Journal:  J Mol Biol       Date:  2011-09-08       Impact factor: 5.469

Review 3.  Alternative splicing and disease.

Authors:  Jamal Tazi; Nadia Bakkour; Stefan Stamm
Journal:  Biochim Biophys Acta       Date:  2008-10-17

Review 4.  Alpha-actinin 4 and tumorigenesis of breast cancer.

Authors:  Kuo-Sheng Hsu; Hung-Ying Kao
Journal:  Vitam Horm       Date:  2013       Impact factor: 3.421

5.  High-throughput alternative splicing quantification by primer extension and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

Authors:  Ron M McCullough; Charles R Cantor; Chunming Ding
Journal:  Nucleic Acids Res       Date:  2005-06-20       Impact factor: 16.971

6.  Evidence that public database records for many cancer-associated genes reflect a splice form found in tumors and lack normal splice forms.

Authors:  Meenakshi Roy; Qiang Xu; Christopher Lee
Journal:  Nucleic Acids Res       Date:  2005-09-07       Impact factor: 16.971

7.  Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.

Authors:  Paul J Gardina; Tyson A Clark; Brian Shimada; Michelle K Staples; Qing Yang; James Veitch; Anthony Schweitzer; Tarif Awad; Charles Sugnet; Suzanne Dee; Christopher Davies; Alan Williams; Yaron Turpaz
Journal:  BMC Genomics       Date:  2006-12-27       Impact factor: 3.969

8.  ACTN4 and the pathways associated with cell motility and adhesion contribute to the process of lung cancer metastasis to the brain.

Authors:  Yufei Gao; Guanghu Li; Liankun Sun; Yichun He; Xiaoyan Li; Zhi Sun; Jihan Wang; Yang Jiang; Jingwei Shi
Journal:  BMC Cancer       Date:  2015-04-12       Impact factor: 4.430

9.  Differentially expressed alternatively spliced genes in malignant pleural mesothelioma identified using massively parallel transcriptome sequencing.

Authors:  Lingsheng Dong; Roderick V Jensen; Assunta De Rienzo; Gavin J Gordon; Yanlong Xu; David J Sugarbaker; Raphael Bueno
Journal:  BMC Med Genet       Date:  2009-12-31       Impact factor: 2.103

10.  easyExon--a Java-based GUI tool for processing and visualization of Affymetrix exon array data.

Authors:  Ting-Yu Chang; Yin-Yi Li; Chih-Hung Jen; Tsun-Po Yang; Chi-Hung Lin; Ming-Ta Hsu; Hsei-Wei Wang
Journal:  BMC Bioinformatics       Date:  2008-10-14       Impact factor: 3.169

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