Literature DB >> 15120969

Integration of clinical and gene expression endpoints to explore furan-mediated hepatotoxicity.

Hisham K Hamadeh1, Supriya Jayadev, Elias T Gaillard, Qihong Huang, Raymond Stoll, Kerry Blanchard, Jeff Chou, Charles J Tucker, Jennifer Collins, Robert Maronpot, Pierre Bushel, Cynthia A Afshari.   

Abstract

Molecular techniques, such as cDNA microarrays, are being used to aid in the elucidation of the mechanisms of toxicity of a variety of compounds. In this study, we evaluate the molecular effects of furan in the rat liver. Sprague-Dawley rats were exposed to 4 or 40 mg/kg furan for up to 14 days. Furan induced an initial degenerative and necrotic phenotype that was followed by inflammation and fibrosis, consistent with previous observations for this compound. RNA was harvested from each lobe of the liver at several time points to observe whether lobe-specific gene expression effects occurred. Similar gene expression changes were observed in all lobes, however the magnitude of gene expression change was more pronounced in the right lobe. Finally, to help determine the correlation between gene expression changes and liver pathology, we applied traditional microarray visualization tools to the assessment of clinical chemistry and pathology parameters.

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Year:  2004        PMID: 15120969     DOI: 10.1016/j.mrfmmm.2003.12.021

Source DB:  PubMed          Journal:  Mutat Res        ISSN: 0027-5107            Impact factor:   2.433


  15 in total

Review 1.  Sources of variance in baseline gene expression in the rodent liver.

Authors:  J Christopher Corton; Pierre R Bushel; Jennifer Fostel; Raegan B O'Lone
Journal:  Mutat Res       Date:  2012-01-05       Impact factor: 2.433

2.  Analysis of Correlated Gene Expression Data on Ordered Categories.

Authors:  Shyamal D Peddada; Shawn F Harris; Ori Davidov
Journal:  J Indian Soc Agric Stat       Date:  2010

Review 3.  The evolution of bioinformatics in toxicology: advancing toxicogenomics.

Authors:  Cynthia A Afshari; Hisham K Hamadeh; Pierre R Bushel
Journal:  Toxicol Sci       Date:  2010-12-22       Impact factor: 4.849

4.  Anatomy of data integration.

Authors:  Olga Brazhnik; John F Jones
Journal:  J Biomed Inform       Date:  2006-09-24       Impact factor: 6.317

5.  Multiwalled carbon nanotube-induced gene signatures in the mouse lung: potential predictive value for human lung cancer risk and prognosis.

Authors:  Nancy L Guo; Ying-Wooi Wan; James Denvir; Dale W Porter; Maricica Pacurari; Michael G Wolfarth; Vincent Castranova; Yong Qian
Journal:  J Toxicol Environ Health A       Date:  2012

Review 6.  Reactive metabolites in the biotransformation of molecules containing a furan ring.

Authors:  Lisa A Peterson
Journal:  Chem Res Toxicol       Date:  2012-10-24       Impact factor: 3.739

7.  Low doses of the carcinogen furan alter cell cycle and apoptosis gene expression in rat liver independent of DNA methylation.

Authors:  Tao Chen; Angela Mally; Sibel Ozden; J Kevin Chipman
Journal:  Environ Health Perspect       Date:  2010-11       Impact factor: 9.031

8.  Furan carcinogenicity: DNA binding and genotoxicity of furan in rats in vivo.

Authors:  Carolin Neuwirth; Pasquale Mosesso; Gaetano Pepe; Mario Fiore; Mike Malfatti; Ken Turteltaub; Wolfgang Dekant; Angela Mally
Journal:  Mol Nutr Food Res       Date:  2012-08-03       Impact factor: 5.914

9.  New perspectives for in vitro risk assessment of multiwalled carbon nanotubes: application of coculture and bioinformatics.

Authors:  Brandi N Snyder-Talkington; Yong Qian; Vincent Castranova; Nancy L Guo
Journal:  J Toxicol Environ Health B Crit Rev       Date:  2012       Impact factor: 6.393

10.  Toxicogenomic biomarkers for liver toxicity.

Authors:  Naoki Kiyosawa; Yosuke Ando; Sunao Manabe; Takashi Yamoto
Journal:  J Toxicol Pathol       Date:  2009-04-06       Impact factor: 1.628

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