Literature DB >> 15111392

Elastic instability in growing yeast colonies.

Baochi Nguyen1, Arpita Upadhyaya, Alexander van Oudenaarden, Michael P Brenner.   

Abstract

The differential adhesion between cells is believed to be the major driving force behind the formation of tissues. The idea is that an aggregate of cells minimizes the overall adhesive energy between cell surfaces. We demonstrate in a model experimental system that there exist conditions where a slowly growing tissue does not minimize this adhesive energy. A mathematical model demonstrates that the instability of a spherical shape is caused by the competition between elastic and surface energies.

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Year:  2004        PMID: 15111392      PMCID: PMC1304144          DOI: 10.1016/S0006-3495(04)74327-1

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  12 in total

1.  Tissue spreading on implantable substrates is a competitive outcome of cell-cell vs. cell-substratum adhesivity.

Authors:  P L Ryan; R A Foty; J Kohn; M S Steinberg
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-27       Impact factor: 11.205

2.  Mechanism of tissue reconstruction by dissociated cells. II. Time-course of events.

Authors:  M S STEINBERG
Journal:  Science       Date:  1962-09-07       Impact factor: 47.728

3.  The cellular basis of Fundulus epiboly. Adhesivity of blastula and gastrula cells in culture.

Authors:  J P TRINKAUS
Journal:  Dev Biol       Date:  1963-03       Impact factor: 3.582

4.  Liquid properties of embryonic tissues: Measurement of interfacial tensions.

Authors: 
Journal:  Phys Rev Lett       Date:  1994-04-04       Impact factor: 9.161

5.  Townes and Holtfreter (1955): directed movements and selective adhesion of embryonic amphibian cells.

Authors:  Malcolm S Steinberg; Scott F Gilbert
Journal:  J Exp Zool A Comp Exp Biol       Date:  2004-09-01

6.  Viscoelastic properties of living embryonic tissues: a quantitative study.

Authors:  G Forgacs; R A Foty; Y Shafrir; M S Steinberg
Journal:  Biophys J       Date:  1998-05       Impact factor: 4.033

7.  Three cell recognition changes accompany the ingression of sea urchin primary mesenchyme cells.

Authors:  R D Fink; D R McClay
Journal:  Dev Biol       Date:  1985-01       Impact factor: 3.582

8.  Bakers' yeast, a model for fungal biofilm formation.

Authors:  T B Reynolds; G R Fink
Journal:  Science       Date:  2001-02-02       Impact factor: 47.728

9.  The mechanical properties of Saccharomyces cerevisiae.

Authors:  A E Smith; Z Zhang; C R Thomas; K E Moxham; A P Middelberg
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-29       Impact factor: 11.205

10.  Surface tensions of embryonic tissues predict their mutual envelopment behavior.

Authors:  R A Foty; C M Pfleger; G Forgacs; M S Steinberg
Journal:  Development       Date:  1996-05       Impact factor: 6.868

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  9 in total

1.  Mat formation in Saccharomyces cerevisiae requires nutrient and pH gradients.

Authors:  Todd B Reynolds; An Jansen; Xin Peng; Gerald R Fink
Journal:  Eukaryot Cell       Date:  2007-10-19

2.  A thin-film extensional flow model for biofilm expansion by sliding motility.

Authors:  Alexander Tam; J Edward F Green; Sanjeeva Balasuriya; Ee Lin Tek; Jennifer M Gardner; Joanna F Sundstrom; Vladimir Jiranek; Benjamin J Binder
Journal:  Proc Math Phys Eng Sci       Date:  2019-09-04       Impact factor: 2.704

3.  Selective sweeps in growing microbial colonies.

Authors:  Kirill S Korolev; Melanie J I Müller; Nilay Karahan; Andrew W Murray; Oskar Hallatschek; David R Nelson
Journal:  Phys Biol       Date:  2012-04-04       Impact factor: 2.583

4.  Beyond Agar: Gel Substrates with Improved Optical Clarity and Drug Efficiency and Reduced Autofluorescence for Microbial Growth Experiments.

Authors:  Philipp A Jaeger; Cameron McElfresh; Lily R Wong; Trey Ideker
Journal:  Appl Environ Microbiol       Date:  2015-06-12       Impact factor: 4.792

5.  Multi-scale modeling of tissues using CompuCell3D.

Authors:  Maciej H Swat; Gilberto L Thomas; Julio M Belmonte; Abbas Shirinifard; Dimitrij Hmeljak; James A Glazier
Journal:  Methods Cell Biol       Date:  2012       Impact factor: 1.441

6.  Multicell simulations of development and disease using the CompuCell3D simulation environment.

Authors:  Maciej H Swat; Susan D Hester; Ariel I Balter; Randy W Heiland; Benjamin L Zaitlen; James A Glazier
Journal:  Methods Mol Biol       Date:  2009

7.  Nutrient shielding in clusters of cells.

Authors:  Maxim O Lavrentovich; John H Koschwanez; David R Nelson
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2013-06-10

8.  Growing yeast into cylindrical colonies.

Authors:  Clément Vulin; Jean-Marc Di Meglio; Ariel B Lindner; Adrian Daerr; Andrew Murray; Pascal Hersen
Journal:  Biophys J       Date:  2014-05-20       Impact factor: 4.033

9.  Efficient microbial colony growth dynamics quantification with ColTapp, an automated image analysis application.

Authors:  Julian Bär; Mathilde Boumasmoud; Roger D Kouyos; Annelies S Zinkernagel; Clément Vulin
Journal:  Sci Rep       Date:  2020-09-30       Impact factor: 4.379

  9 in total

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