Literature DB >> 15109776

The impact of very short alternative splicing on protein structures and functions in the human genome.

Fang Wen1, Fei Li, Huiyu Xia, Xin Lu, Xuegong Zhang, Yanda Li.   

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Year:  2004        PMID： 15109776     DOI： 10.1016/j.tig.2004.03.005

Source DB:  PubMed          Journal:  Trends Genet        ISSN： 0168-9525            Impact factor:   11.639


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  12 in total

1.  The implications of alternative splicing in the ENCODE protein complement.

Authors:  Michael L Tress; Pier Luigi Martelli; Adam Frankish; Gabrielle A Reeves; Jan Jaap Wesselink; Corin Yeats; Páll Isólfur Olason; Mario Albrecht; Hedi Hegyi; Alejandro Giorgetti; Domenico Raimondo; Julien Lagarde; Roman A Laskowski; Gonzalo López; Michael I Sadowski; James D Watson; Piero Fariselli; Ivan Rossi; Alinda Nagy; Wang Kai; Zenia Størling; Massimiliano Orsini; Yassen Assenov; Hagen Blankenburg; Carola Huthmacher; Fidel Ramírez; Andreas Schlicker; France Denoeud; Phil Jones; Samuel Kerrien; Sandra Orchard; Stylianos E Antonarakis; Alexandre Reymond; Ewan Birney; Søren Brunak; Rita Casadio; Roderic Guigo; Jennifer Harrow; Henning Hermjakob; David T Jones; Thomas Lengauer; Christine A Orengo; László Patthy; Janet M Thornton; Anna Tramontano; Alfonso Valencia
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-19       Impact factor: 11.205

Review 2.  Genome and proteome annotation: organization, interpretation and integration.

Authors:  Gabrielle A Reeves; David Talavera; Janet M Thornton
Journal:  J R Soc Interface       Date:  2009-02-06       Impact factor: 4.118

3.  Sequence features involved in the mechanism of 3' splice junction wobbling.

Authors:  Kuo-Wang Tsai; Wen-Ching Chan; Chun-Nan Hsu; Wen-Chang Lin
Journal:  BMC Mol Biol       Date:  2010-05-07       Impact factor: 2.946

4.  Wobble splicing reveals the role of the branch point sequence-to-NAGNAG region in 3' tandem splice site selection.

Authors:  Kuo-Wang Tsai; Woan-Yuh Tarn; Wen-Chang Lin
Journal:  Mol Cell Biol       Date:  2007-06-11       Impact factor: 4.272

5.  Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis.

Authors:  Matthew A Campbell; Brian J Haas; John P Hamilton; Stephen M Mount; C Robin Buell
Journal:  BMC Genomics       Date:  2006-12-28       Impact factor: 3.969

6.  An expectation-maximization algorithm for probabilistic reconstructions of full-length isoforms from splice graphs.

Authors:  Yi Xing; Tianwei Yu; Ying Nian Wu; Meenakshi Roy; Joseph Kim; Christopher Lee
Journal:  Nucleic Acids Res       Date:  2006-06-06       Impact factor: 16.971

7.  The effects of multiple features of alternatively spliced exons on the K(A)/K(S) ratio test.

Authors:  Feng-Chi Chen; Trees-Juen Chuang
Journal:  BMC Bioinformatics       Date:  2006-05-19       Impact factor: 3.169

8.  Gene set enrichment analysis of RNA-Seq data: integrating differential expression and splicing.

Authors:  Xi Wang; Murray J Cairns
Journal:  BMC Bioinformatics       Date:  2013-04-10       Impact factor: 3.169

9.  Overexpression of CERKL, a gene responsible for retinitis pigmentosa in humans, protects cells from apoptosis induced by oxidative stress.

Authors:  Miquel Tuson; Alejandro Garanto; Roser Gonzàlez-Duarte; Gemma Marfany
Journal:  Mol Vis       Date:  2009-01-21       Impact factor: 2.367

Review 10.  Bioinformatics in China: a personal perspective.

Authors:  Liping Wei; Jun Yu
Journal:  PLoS Comput Biol       Date:  2008-04-25       Impact factor: 4.475
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