Literature DB >> 15101391

Evolutionary convergence of alternative splicing in ion channels.

Richard R Copley1.   

Abstract

In Drosophila melanogaster and humans, members of three different ion-channel gene families share tandem exon duplications, which are alternatively spliced. In this article, I demonstrate that the duplication events that give rise to these mutually exclusive exons are unlikely to be ancestral but have probably occurred independently in different lineages. These events provide remarkable examples of evolutionary convergence in alternative splicing. The result has important implications for the analysis of regulation of alternative splicing using comparative genomics and our understanding of molecular evolution.

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Year:  2004        PMID: 15101391     DOI: 10.1016/j.tig.2004.02.001

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  30 in total

1.  Evolution of alternative splicing after gene duplication.

Authors:  Zhixi Su; Jianmin Wang; Jun Yu; Xiaoqiu Huang; Xun Gu
Journal:  Genome Res       Date:  2005-12-19       Impact factor: 9.043

2.  The mutually exclusive flip and flop exons of AMPA receptor genes were derived from an intragenic duplication in the vertebrate lineage.

Authors:  Yu-Chia Chen; Wei-Hsiang Lin; Der-Wang Tzeng; Wei-Yuan Chow
Journal:  J Mol Evol       Date:  2006-01-13       Impact factor: 2.395

Review 3.  The animal in the genome: comparative genomics and evolution.

Authors:  Richard R Copley
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2008-04-27       Impact factor: 6.237

4.  Alternative splicing of Na(V)1.7 exon 5 increases the impact of the painful PEPD mutant channel I1461T.

Authors:  Brian W Jarecki; Patrick L Sheets; Yucheng Xiao; James O Jackson; Theodore R Cummins
Journal:  Channels (Austin)       Date:  2009-07-23       Impact factor: 2.581

5.  Role and convergent evolution of competing RNA secondary structures in mutually exclusive splicing.

Authors:  Yuan Yue; Shouqing Hou; Xiu Wang; Leilei Zhan; Guozheng Cao; Guoli Li; Yang Shi; Peng Zhang; Weiling Hong; Hao Lin; Baoping Liu; Feng Shi; Yun Yang; Yongfeng Jin
Journal:  RNA Biol       Date:  2017-02-17       Impact factor: 4.652

6.  Genetic predictors of the maximum doses patients receive during clinical use of the anti-epileptic drugs carbamazepine and phenytoin.

Authors:  Sarah K Tate; Chantal Depondt; Sanjay M Sisodiya; Gianpiero L Cavalleri; Stephanie Schorge; Nicole Soranzo; Maria Thom; Arjune Sen; Simon D Shorvon; Josemir W Sander; Nicholas W Wood; David B Goldstein
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-01       Impact factor: 11.205

7.  SCN1A and SCN2A polymorphisms are associated with response to valproic acid in Chinese epilepsy patients.

Authors:  Lihong Shi; Miaomiao Zhu; Huilan Li; Zhipeng Wen; Xiaoping Chen; Jia Luo; Cong Lin; Zanling Zhang
Journal:  Eur J Clin Pharmacol       Date:  2019-01-28       Impact factor: 2.953

8.  SCN1A splice variants exhibit divergent sensitivity to commonly used antiepileptic drugs.

Authors:  Christopher H Thompson; Kristopher M Kahlig; Alfred L George
Journal:  Epilepsia       Date:  2011-03-31       Impact factor: 5.864

9.  Evolution of a plant-specific copper chaperone family for chloroplast copper homeostasis.

Authors:  Crysten E Blaby-Haas; Teresita Padilla-Benavides; Roland Stübe; José M Argüello; Sabeeha S Merchant
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-02       Impact factor: 11.205

10.  A mutually exclusive alternative exon of slo1 codes for a neuronal BK channel with altered function.

Authors:  Malle Soom; Guido Gessner; Heike Heuer; Toshinori Hoshi; Stefan H Heinemann
Journal:  Channels (Austin)       Date:  2008-07-08       Impact factor: 2.581

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