Literature DB >> 15100221

The formation of straight and twisted filaments from short tau peptides.

Warren J Goux1, Lauren Kopplin, Anh D Nguyen, Kathryn Leak, Marni Rutkofsky, Vasanthi D Shanmuganandam, Deepak Sharma, Hideyo Inouye, Daniel A Kirschner.   

Abstract

We studied fibril formation in a family of peptides based on PHF6 (VQIVYK), a short peptide segment found in the microtubule binding region of tau protein. N-Acetylated peptides AcVYK-amide (AcVYK), AcIVYK-amide (AcPHF4), AcQIVYK-amide (AcPHF5), and AcV-QIVYK-amide (AcPHF6) rapidly formed straight filaments in the presence of 0.15 m NaCl, each composed of two laterally aligned protofilaments approximately 5 nm in width. X-ray fiber diffraction showed the omnipresent sharp 4.7-A reflection indicating that the scattering objects are likely elongated along the hydrogen-bonding direction in a cross-beta conformation, and Fourier transform IR suggested the peptide chains were in a parallel (AcVYK, AcPHF6) or antiparallel (AcPHF4, AcPHF5) beta-sheet configuration. The dipeptide N-acetyl-YK-amide (AcYK) formed globular structures approximately 200 nm to 1 microm in diameter. The polymerization rate, as measured by thioflavin S binding, increased with the length of the peptide going from AcYK --> AcPHF6, and peptides that aggregated most rapidly displayed CD spectra consistent with beta-sheet structure. There was a 3-fold decrease in rate when Val was substituted for Ile or Gln, nearly a 10-fold decrease when Ala was substituted for Tyr, and an increase in polymerization rate when Glu was substituted for Lys. Twisted filaments, composed of four laterally aligned protofilaments (9-19 nm width, approximately 90 nm half-periodicity), were formed by mixing AcPHF6 with AcVYK. Taken together these results suggest that the core of PHF6 is localized at VYK, and the interaction between small amphiphilic segments of tau may initiate nucleation and lead to filaments displaying paired helical filament morphology.

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Year:  2004        PMID: 15100221     DOI: 10.1074/jbc.M402379200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  68 in total

1.  Understanding the kinetic roles of the inducer heparin and of rod-like protofibrils during amyloid fibril formation by Tau protein.

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Journal:  J Mol Neurosci       Date:  2019-05-06       Impact factor: 3.444

3.  Self-propagating beta-sheet polypeptide structures as prebiotic informational molecular entities: the amyloid world.

Authors:  C P J Maury
Journal:  Orig Life Evol Biosph       Date:  2009-03-20       Impact factor: 1.950

Review 4.  Therapeutic Strategies for Restoring Tau Homeostasis.

Authors:  Zapporah T Young; Sue Ann Mok; Jason E Gestwicki
Journal:  Cold Spring Harb Perspect Med       Date:  2018-01-02       Impact factor: 6.915

5.  Quick shear-flow alignment of biological filaments for X-ray fiber diffraction facilitated by methylcellulose.

Authors:  Takaaki Sugiyama; Daisuke Miyashiro; Daisuke Takao; Hiroyuki Iwamoto; Yasunobu Sugimoto; Katsuzo Wakabayashi; Shinji Kamimura
Journal:  Biophys J       Date:  2009-12-16       Impact factor: 4.033

6.  Quantitative characterization of heparin binding to Tau protein: implication for inducer-mediated Tau filament formation.

Authors:  Hai-Li Zhu; Cristina Fernández; Jun-Bao Fan; Frank Shewmaker; Jie Chen; Allen P Minton; Yi Liang
Journal:  J Biol Chem       Date:  2009-12-03       Impact factor: 5.157

7.  Structure-based design of non-natural amino-acid inhibitors of amyloid fibril formation.

Authors:  Stuart A Sievers; John Karanicolas; Howard W Chang; Anni Zhao; Lin Jiang; Onofrio Zirafi; Jason T Stevens; Jan Münch; David Baker; David Eisenberg
Journal:  Nature       Date:  2011-06-15       Impact factor: 49.962

8.  Systematic examination of polymorphism in amyloid fibrils by molecular-dynamics simulation.

Authors:  Joshua T Berryman; Sheena E Radford; Sarah A Harris
Journal:  Biophys J       Date:  2011-05-04       Impact factor: 4.033

9.  Amyloidogenic sequences in native protein structures.

Authors:  Susan Tzotzos; Andrew J Doig
Journal:  Protein Sci       Date:  2010-02       Impact factor: 6.725

10.  Coarse-grained molecular dynamics studies of the structure and stability of peptide-based drug amphiphile filaments.

Authors:  Myungshim Kang; Honggang Cui; Sharon M Loverde
Journal:  Soft Matter       Date:  2017-11-01       Impact factor: 3.679

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