Literature DB >> 15096616

Arabidopsis thaliana has the enzymatic machinery for replicating representative viroid species of the family Pospiviroidae.

José-Antonio Daròs1, Ricardo Flores.   

Abstract

Viroids, subviral noncoding RNAs, replicate, move, and incite diseases in plants. Viroids replicate through a rolling-circle mechanism in which oligomeric RNAs of one or both polarities are cleaved and ligated into the circular monomers. Attempts to transmit viroids to Arabidopsis have failed for unknown reasons. To tackle this question, Arabidopsis was transformed with cDNAs expressing dimeric (+) transcripts of representative species of the families Pospiviroidae and Avsunviroidae, which replicate in the nucleus and the chloroplast, respectively. Correct processing to the circular (+) monomers was always observed, demonstrating that Arabidopsis has the appropriate RNase and RNA ligase. Northern blot hybridization also revealed the multimeric (-) RNAs of Citrus exocortis viroid and Hop stunt viroid (HSVd) of the family Pospiviroidae, but not of Avocado sunblotch viroid of the family Avsunviroidae, showing that the first RNA-RNA transcription of the rolling-circle mechanism occurs in Arabidopsis for the two nuclear viroids and that their multimeric (-) RNAs remain unprocessed as in typical hosts. Moreover, transgenic Arabidopsis expressing HSVd dimeric (-) transcripts accumulated the circular (+) monomers, although at low levels, together with the unprocessed primary transcript that served as the template for the second RNA-RNA transcription. Agroinoculation of Arabidopsis with the dimeric (+) Citrus exocortis viroid, HSVd, and Coleus blumei viroid 1 cDNAs showed that these viroids could not move to distal plant parts, in contrast with the situation observed in their experimental hosts. Therefore, deficiencies in movement or low replication appear to be the factors limiting infectivity of some viroids in Arabidopsis.

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Year:  2004        PMID: 15096616      PMCID: PMC404124          DOI: 10.1073/pnas.0401090101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  50 in total

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Authors:  Chris Somerville; Maarten Koornneef
Journal:  Nat Rev Genet       Date:  2002-11       Impact factor: 53.242

2.  Exocortis disease: evidence for a new species of "infectious" low molecular weight RNA in plants.

Authors:  J S Semancik; L G Weathers
Journal:  Nat New Biol       Date:  1972-06-21

3.  RNA intermediates in potato spindle tuber viroid replication.

Authors:  R A Owens; T O Diener
Journal:  Proc Natl Acad Sci U S A       Date:  1982-01       Impact factor: 11.205

4.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

5.  Processing of linear longer-than-unit-length potato spindle tuber viroid RNAs into infectious monomeric circular molecules by a G-specific endoribonuclease.

Authors:  M Tabler; S Tzortzakaki; M Tsagris
Journal:  Virology       Date:  1992-10       Impact factor: 3.616

6.  Eggplant latent viroid, the candidate type species for a new genus within the family Avsunviroidae (hammerhead viroids).

Authors:  Z Fadda; J A Daròs; C Fagoaga; R Flores; N Duran-Vila
Journal:  J Virol       Date:  2003-06       Impact factor: 5.103

7.  Avocado sunblotch viroid: primary sequence and proposed secondary structure.

Authors:  R H Symons
Journal:  Nucleic Acids Res       Date:  1981-12-11       Impact factor: 16.971

8.  Potato spindle tuber viroid: Investigation of the long-distance, intra-plant transport route.

Authors:  P Palukaitis
Journal:  Virology       Date:  1987-05       Impact factor: 3.616

9.  Linear oligomeric potato spindle tuber viroid (PSTV) RNAs are accurately processed in vitro to the monomeric circular viroid proper when incubated with a nuclear extract from healthy potato cells.

Authors:  M Tsagris; M Tabler; H P Mühlbach; H L Sänger
Journal:  EMBO J       Date:  1987-08       Impact factor: 11.598

Review 10.  Avsunviroidae family: viroids containing hammerhead ribozymes.

Authors:  R Flores; J A Daròs; C Hernández
Journal:  Adv Virus Res       Date:  2000       Impact factor: 9.937

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  33 in total

1.  Replication of avocado sunblotch viroid in the yeast Saccharomyces cerevisiae.

Authors:  Clémentine Delan-Forino; Marie-Christine Maurel; Claire Torchet
Journal:  J Virol       Date:  2011-01-26       Impact factor: 5.103

Review 2.  Viroids: an Ariadne's thread into the RNA labyrinth.

Authors:  José-Antonio Daròs; Santiago F Elena; Ricardo Flores
Journal:  EMBO Rep       Date:  2006-06       Impact factor: 8.807

3.  Dissecting the secondary structure of the circular RNA of a nuclear viroid in vivo: A "naked" rod-like conformation similar but not identical to that observed in vitro.

Authors:  Amparo López-Carrasco; Ricardo Flores
Journal:  RNA Biol       Date:  2016-08-30       Impact factor: 4.652

4.  Functional hammerhead ribozymes naturally encoded in the genome of Arabidopsis thaliana.

Authors:  Rita Przybilski; Stefan Gräf; Aurélie Lescoute; Wolfgang Nellen; Eric Westhof; Gerhard Steger; Christian Hammann
Journal:  Plant Cell       Date:  2005-06-03       Impact factor: 11.277

5.  How sequence variants of a plastid-replicating viroid with one single nucleotide change initiate disease in its natural host.

Authors:  Sonia Delgado; Beatriz Navarro; Pedro Serra; Pascal Gentit; Miguel-Ángel Cambra; Michela Chiumenti; Angelo De Stradis; Francesco Di Serio; Ricardo Flores
Journal:  RNA Biol       Date:  2019-04-16       Impact factor: 4.652

6.  Processing of RNAs of the family Avsunviroidae in Chlamydomonas reinhardtii chloroplasts.

Authors:  Diego Molina-Serrano; Loreto Suay; María L Salvador; Ricardo Flores; José-Antonio Daròs
Journal:  J Virol       Date:  2007-02-07       Impact factor: 5.103

7.  Apple scar skin viroid naked RNA is actively transmitted by the whitefly Trialeurodes vaporariorum.

Authors:  Yashika Walia; Sunny Dhir; Aijaz Asghar Zaidi; Vipin Hallan
Journal:  RNA Biol       Date:  2015-09-01       Impact factor: 4.652

8.  Monomeric linear RNA of citrus exocortis viroid resulting from processing in vivo has 5'-phosphomonoester and 3'-hydroxyl termini: implications for the RNase and RNA ligase involved in replication.

Authors:  María-Eugenia Gas; Diego Molina-Serrano; Carmen Hernández; Ricardo Flores; José-Antonio Daròs
Journal:  J Virol       Date:  2008-08-13       Impact factor: 5.103

9.  Specific argonautes selectively bind small RNAs derived from potato spindle tuber viroid and attenuate viroid accumulation in vivo.

Authors:  Sofia Minoia; Alberto Carbonell; Francesco Di Serio; Andreas Gisel; James C Carrington; Beatriz Navarro; Ricardo Flores
Journal:  J Virol       Date:  2014-08-06       Impact factor: 5.103

10.  Processing of Potato Spindle Tuber Viroid RNAs in Yeast, a Nonconventional Host.

Authors:  Dillon Friday; Priyadarshini Mukkara; Robert A Owens; Tilman Baumstark; Michael F Bruist
Journal:  J Virol       Date:  2017-11-30       Impact factor: 5.103

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