Literature DB >> 15096035

Catalytic and structural role of a metal-free histidine residue in bovine Cu-Zn superoxide dismutase.

Akira Toyama1, Yohko Takahashi, Hideo Takeuchi.   

Abstract

Cu-Zn superoxide dismutase (SOD) contains a conserved, metal-free His residue at an opening of the backbone beta-barrel in addition to six Cu- and/or Zn-bound His residues in the active site. We examined the protonation and hydrogen bonding state of the metal-free His residue (His41) in bovine SOD by UV Raman spectroscopy. Analysis of the His Raman intensity at 1406 cm(-1) in a D2O solution has shown that His41 has a pKa of 9.4, consistent with the NMR and X-ray structures at acidic to neutral pH, in which two imidazole nitrogen atoms of cationic His41 are hydrogen bonded to the main chain C=O groups of Thr37 and His118. Upon deprotonation of His41 at pH 9.4, the Thr37-His41-His118 hydrogen bond bridge breaks on the His118 side and SOD loses 70% of its activity. Concomitantly, hydrogen-deuterium exchange is accelerated for amide groups of beta-strands, indicating an increased conformational fluctuation of the beta-barrel. Thr37 and His41 are in direct contact with Leu36, whose hydrophobic side chain closes off the opening of the beta-barrel, while His118 is indirectly connected to Arg141 that assists the docking of superoxide to Cu. These Raman findings strongly suggest that the His41-mediated hydrogen bond bridge plays a crucial role in keeping the protein structure suitable for highly efficient catalytic reactions. The catalytic and structural role of His41 is consistent with the observation that the mutation of His43 in human SOD (equivalent to His41 in bovine SOD) to Arg largely reduces the dismutase activity and the protein structural stability.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15096035     DOI: 10.1021/bi049767k

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  4 in total

1.  Solvent-based deuterium isotope effects on the redox thermodynamics of cytochrome c.

Authors:  G Battistuzzi; M Borsari; A Ranieri; M Sola
Journal:  J Biol Inorg Chem       Date:  2004-07-27       Impact factor: 3.358

2.  Oxidation of histidine residues in copper-zinc superoxide dismutase by bicarbonate-stimulated peroxidase and thiol oxidase activities: pulse EPR and NMR studies.

Authors:  Karunakaran Chandran; John McCracken; Francis C Peterson; William E Antholine; Brian F Volkman; Balaraman Kalyanaraman
Journal:  Biochemistry       Date:  2010-11-23       Impact factor: 3.162

3.  Mechanistic basis for inflammation and tumor promotion in lungs of 2,6-di-tert-butyl-4-methylphenol-treated mice: electrophilic metabolites alkylate and inactivate antioxidant enzymes.

Authors:  Brent W Meier; Jose D Gomez; Oleg V Kirichenko; John A Thompson
Journal:  Chem Res Toxicol       Date:  2007-02       Impact factor: 3.739

4.  Identification of structurally conserved residues of proteins in absence of structural homologs using neural network ensemble.

Authors:  Ganesan Pugalenthi; Ke Tang; P N Suganthan; Saikat Chakrabarti
Journal:  Bioinformatics       Date:  2008-11-27       Impact factor: 6.937

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.