Literature DB >> 15095886

Using Biowin, Bayes, and batteries to predict ready biodegradability.

Robert S Boethling1, David G Lynch, Joanna S Jaworska, Jay L Tunkel, Gary C Thom, Simon Webb.   

Abstract

Whether or not a given chemical substance is readily biodegradable is an important piece of information in risk screening for both new and existing chemicals. Despite the relatively low cost of Organization for Economic Cooperation and Development tests, data are often unavailable and biodegradability must be estimated. In this paper, we focus on the predictive value of selected Biowin models and model batteries using Bayesian analysis. Posterior probabilities, calculated based on performance with the model training sets using Bayes' theorem, were closely matched by actual performance with an expanded set of 374 premanufacture notice (PMN) substances. Further analysis suggested that a simple battery consisting of Biowin3 (survey ultimate biodegradation model) and Biowin5 (Ministry of International Trade and Industry [MITI] linear model) would have enhanced predictive power in comparison to individual models. Application of the battery to PMN substances showed that performance matched expectation. This approach significantly reduced both false positives for ready biodegradability and the overall misclassification rate. Similar results were obtained for a set of 63 pharmaceuticals using a battery consisting of Biowin3 and Biowin6 (MITI nonlinear model). Biodegradation data for PMNs tested in multiple ready tests or both inherent and ready biodegradation tests yielded additional insights that may be useful in risk screening.

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Year:  2004        PMID: 15095886     DOI: 10.1897/03-280

Source DB:  PubMed          Journal:  Environ Toxicol Chem        ISSN: 0730-7268            Impact factor:   3.742


  4 in total

1.  Incorporation of in silico biodegradability screening in early drug development--a feasible approach?

Authors:  Thomas Steger-Hartmann; Reinhard Länge; Klaus Heuck
Journal:  Environ Sci Pollut Res Int       Date:  2010-10-28       Impact factor: 4.223

Review 2.  Evaluation of artificial intelligence based models for chemical biodegradability prediction.

Authors:  James R Baker; Dragan Gamberger; James R Mihelcic; Aleksandar Sabljić
Journal:  Molecules       Date:  2004-12-31       Impact factor: 4.411

3.  Prioritizing organic chemicals for long-term air monitoring by using empirical monitoring data--application to data from the Swedish screening program.

Authors:  Anna Palm Cousins; Eva Brorström-Lundén; Britta Hedlund
Journal:  Environ Monit Assess       Date:  2011-09-08       Impact factor: 2.513

4.  Searching for "environmentally-benign" antifouling biocides.

Authors:  Yan Ting Cui; Serena L M Teo; Wai Leong; Christina L L Chai
Journal:  Int J Mol Sci       Date:  2014-05-26       Impact factor: 5.923

  4 in total

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