Literature DB >> 1508669

Structure of the human DNA ligase I gene.

P Noguiez1, D E Barnes, H W Mohrenweiser, T Lindahl.   

Abstract

The gene encoding DNA ligase I, the major DNA ligase activity in proliferating mammalian cells, maps to human chromosome 19q13.2-13.3. We have determined the complete structure of the gene, which is composed of 28 exons spanning 53kb on this chromosome. The first exon is untranslated, and utilises a GC dinucleotide instead of the canonical GT splice donor. The 5' flanking region lacks a TATA box and is highly GC-rich, as is characteristic of a 'housekeeping' gene. In common with the promoters of genes encoding other DNA replication enzymes, such as DNA polymerase alpha, the 5' flanking region of the DNA ligase I gene contains recognition elements for several transcription factors which may mediate increased expression in quiescent cells in response to growth factors.

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Year:  1992        PMID: 1508669      PMCID: PMC334057          DOI: 10.1093/nar/20.15.3845

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  48 in total

Review 1.  Mammalian DNA ligases.

Authors:  T Lindahl; D E Barnes
Journal:  Annu Rev Biochem       Date:  1992       Impact factor: 23.643

2.  Assembly and analysis of cosmid contigs in the CEA-gene family region of human chromosome 19.

Authors:  K Tynan; A Olsen; B Trask; P de Jong; J Thompson; W Zimmermann; A Carrano; H Mohrenweiser
Journal:  Nucleic Acids Res       Date:  1992-04-11       Impact factor: 16.971

3.  DNA ligases during rat liver regeneration.

Authors:  S Söderhäll
Journal:  Nature       Date:  1976-04-15       Impact factor: 49.962

4.  DNA ligases from rat liver. Purification and partial characterization of two molecular forms.

Authors:  R H Elder; J M Rossignol
Journal:  Biochemistry       Date:  1990-06-26       Impact factor: 3.162

5.  Improved double-stranded DNA sequencing using the linear polymerase chain reaction.

Authors:  V Murray
Journal:  Nucleic Acids Res       Date:  1989-11-11       Impact factor: 16.971

6.  A cellular protein, activating transcription factor, activates transcription of multiple E1A-inducible adenovirus early promoters.

Authors:  K A Lee; T Y Hai; L SivaRaman; B Thimmappaya; H C Hurst; N C Jones; M R Green
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

7.  Human DNA ligase I cDNA: cloning and functional expression in Saccharomyces cerevisiae.

Authors:  D E Barnes; L H Johnston; K Kodama; A E Tomkinson; D D Lasko; T Lindahl
Journal:  Proc Natl Acad Sci U S A       Date:  1990-09       Impact factor: 11.205

8.  Location of the active site for enzyme-adenylate formation in DNA ligases.

Authors:  A E Tomkinson; N F Totty; M Ginsburg; T Lindahl
Journal:  Proc Natl Acad Sci U S A       Date:  1991-01-15       Impact factor: 11.205

9.  A conserved region in intron 1 negatively regulates the expression of the PCNA gene.

Authors:  H Alder; M Yoshinouchi; M B Prystowsky; P Appasamy; R Baserga
Journal:  Nucleic Acids Res       Date:  1992-04-11       Impact factor: 16.971

10.  Activation of mammalian DNA ligase I through phosphorylation by casein kinase II.

Authors:  C Prigent; D D Lasko; K Kodama; J R Woodgett; T Lindahl
Journal:  EMBO J       Date:  1992-08       Impact factor: 11.598

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  6 in total

1.  Molecular cloning of the human nucleotide-excision-repair gene ERCC4.

Authors:  L H Thompson; K W Brookman; C A Weber; E P Salazar; J T Reardon; A Sancar; Z Deng; M J Siciliano
Journal:  Proc Natl Acad Sci U S A       Date:  1994-07-19       Impact factor: 11.205

2.  DNA ligase I gene expression during differentiation and cell proliferation.

Authors:  A Montecucco; G Biamonti; E Savini; F Focher; S Spadari; G Ciarrocchi
Journal:  Nucleic Acids Res       Date:  1992-12-11       Impact factor: 16.971

3.  Molecular cloning and expression of human cDNAs encoding a novel DNA ligase IV and DNA ligase III, an enzyme active in DNA repair and recombination.

Authors:  Y F Wei; P Robins; K Carter; K Caldecott; D J Pappin; G L Yu; R P Wang; B K Shell; R A Nash; P Schär
Journal:  Mol Cell Biol       Date:  1995-06       Impact factor: 4.272

4.  Structure and expression of the excision repair gene ERCC6, involved in the human disorder Cockayne's syndrome group B.

Authors:  C Troelstra; W Hesen; D Bootsma; J H Hoeijmakers
Journal:  Nucleic Acids Res       Date:  1993-02-11       Impact factor: 16.971

5.  A case-control study of the association of the polymorphisms and haplotypes of DNA ligase I with lung and upper-aerodigestive-tract cancers.

Authors:  Yuan-Chin Amy Lee; Hal Morgenstern; Sander Greenland; Donald P Tashkin; Jeanette Papp; Janet Sinsheimer; Wei Cao; Mia Hashibe; Nai-Chieh Y You; Jenny T Mao; Wendy Cozen; Thomas M Mack; Zuo-Feng Zhang
Journal:  Int J Cancer       Date:  2008-04-01       Impact factor: 7.396

6.  Cataloguing functionally relevant polymorphisms in gene DNA ligase I: a computational approach.

Authors:  Abhishek A Singh; Dakshinamurthy Sivakumar; Pallavi Somvanshi
Journal:  3 Biotech       Date:  2011-04-27       Impact factor: 2.406

  6 in total

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