Literature DB >> 15071057

Molecular characterization of a prophage of Salmonella enterica serotype Typhimurium DT104.

Kiyoshi Tanaka1, Kei Nishimori, Sou-Ichi Makino, Tomoko Nishimori, Toru Kanno, Ryoko Ishihara, Toshiya Sameshima, Masato Akiba, Muneo Nakazawa, Yuichi Yokomizo, Ikuo Uchida.   

Abstract

Isolates of the Salmonella enterica serotype Typhimurium definitive phage type (DT104) were found to contain the same prophage (designated phage ST104). The complete sequence of the DNA genome of prophage ST104 was determined. The entire DNA sequence consisted of 41,391 bp, including 64 open reading frames, and exhibited high similarity to P22 and to phage type conversion phage ST64T.

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Year:  2004        PMID： 15071057      PMCID： PMC387611          DOI： 10.1128/JCM.42.4.1807-1812.2004

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  17 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
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2.  GeneMark.hmm: new solutions for gene finding.

Authors:  A V Lukashin; M Borodovsky
Journal:  Nucleic Acids Res       Date:  1998-02-15       Impact factor: 16.971

Review 3.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

4.  Emergence of multidrug-resistant Salmonella enterica serotype typhimurium DT104 infections in the United States.

Authors:  M K Glynn; C Bopp; W Dewitt; P Dabney; M Mokhtar; F J Angulo
Journal:  N Engl J Med       Date:  1998-05-07       Impact factor: 91.245

5.  Increasing spectrum of resistance in multiresistant Salmonella typhimurium.

Authors:  E J Threlfall; J A Frost; L R Ward; B Rowe
Journal:  Lancet       Date:  1996-04-13       Impact factor: 79.321

6.  A segment of the phage HK022 chromosome is a mosaic of other lambdoid chromosomes.

Authors:  J Oberto; S B Sloan; R A Weisberg
Journal:  Nucleic Acids Res       Date:  1994-02-11       Impact factor: 16.971

7.  Epidemic in cattle and humans of Salmonella typhimurium DT 104 with chromosomally integrated multiple drug resistance.

Authors:  E J Threlfall; J A Frost; L R Ward; B Rowe
Journal:  Vet Rec       Date:  1994-05-28       Impact factor: 2.695

8.  A new gene of bacteriophage P22 which regulates synthesis of antirepressor.

Authors:  M M Susskind
Journal:  J Mol Biol       Date:  1980-04-25       Impact factor: 5.469

9.  Transduction of multiple drug resistance of Salmonella enterica serovar typhimurium DT104.

Authors:  H Schmieger; P Schicklmaier
Journal:  FEMS Microbiol Lett       Date:  1999-01-01       Impact factor: 2.742

Review 10.  Tailed bacteriophages: the order caudovirales.

Authors:  H W Ackermann
Journal:  Adv Virus Res       Date:  1998       Impact factor: 9.937
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  18 in total

1.  Identification of novel Salmonella enterica serovar Typhimurium DT104-specific prophage and nonprophage chromosomal sequences among serovar Typhimurium isolates by genomic subtractive hybridization.

Authors:  Armand P H M Hermans; Tjakko Abee; Marcel H Zwietering; Henk J M Aarts
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

2.  Whole-genome analysis of Salmonella enterica serovar Typhimurium T000240 reveals the acquisition of a genomic island involved in multidrug resistance via IS1 derivatives on the chromosome.

Authors:  Hidemasa Izumiya; Tsuyoshi Sekizuka; Hideo Nakaya; Masumi Taguchi; Akio Oguchi; Natsuko Ichikawa; Rika Nishiko; Shuji Yamazaki; Nobuyuki Fujita; Haruo Watanabe; Makoto Ohnishi; Makoto Kuroda
Journal:  Antimicrob Agents Chemother       Date:  2010-11-22       Impact factor: 5.191

3.  Genetic relationships of phage types and single nucleotide polymorphism typing of Salmonella enterica Serovar Typhimurium.

Authors:  Stanley Pang; Sophie Octavia; Peter R Reeves; Qinning Wang; Gwendolyn L Gilbert; Vitali Sintchenko; Ruiting Lan
Journal:  J Clin Microbiol       Date:  2012-01-11       Impact factor: 5.948

4.  Molecular epidemiology of Salmonella enterica serovar typhimurium isolates from cattle in hokkaido, Japan: evidence of clonal replacement and characterization of the disseminated clone.

Authors:  Yukino Tamamura; Ikuo Uchida; Kiyoshi Tanaka; Hizuru Okazaki; Satoru Tezuka; Hideki Hanyu; Natsumi Kataoka; Sou-Ichi Makino; Masato Kishima; Takayuki Kubota; Toru Kanno; Shinichi Hatama; Ryoko Ishihara; Eiji Hata; Hironari Yamada; Yuuji Nakaoka; Masato Akiba
Journal:  Appl Environ Microbiol       Date:  2011-01-14       Impact factor: 4.792

5.  Detection of multidrug-resistant Salmonella enterica serovar typhimurium phage types DT102, DT104, and U302 by multiplex PCR.

Authors:  Cheng-Hsun Chiu; Lin-Hui Su; Chi-Hong Chu; Mei-Hwei Wang; Chia-Ming Yeh; Francois-Xavier Weill; Chishih Chu
Journal:  J Clin Microbiol       Date:  2006-07       Impact factor: 5.948

6.  Identification of specific gene sequences conserved in contemporary epidemic strains of Salmonella enterica.

Authors:  Min-Su Kang; Thomas E Besser; Dale D Hancock; Steffen Porwollik; Michael McClelland; Douglas R Call
Journal:  Appl Environ Microbiol       Date:  2006-09-08       Impact factor: 4.792

7.  Genomic comparison of Salmonella typhimurium DT104 with non-DT104 strains.

Authors:  Er-Ying Zhao; Hong-Xia Bao; Le Tang; Qing-Hua Zou; Wei-Qiao Liu; Da-Ling Zhu; Jessica Chin; Ying-Ying Dong; Yong-Guo Li; Feng-Lin Cao; Cornelis Poppe; Kenneth E Sanderson; Randal N Johnston; Daoguo Zhou; Gui-Rong Liu; Shu-Lin Liu
Journal:  Mol Genet Genomics       Date:  2013-08-11       Impact factor: 3.291

8.  Characterization of a Salmonella Enteritidis bacteriophage showing broad lytic activity against Gram-negative enteric bacteria.

Authors:  Shukho Kim; Sung-Hun Kim; Marzia Rahman; Jungmin Kim
Journal:  J Microbiol       Date:  2018-10-25       Impact factor: 3.422

9.  Genomic Characterization of Salmonella typhimurium DT104 Strains Associated with Cattle and Beef Products.

Authors:  Craig T Parker; Steven Huynh; Aaron Alexander; Andrew S Oliver; Kerry K Cooper
Journal:  Pathogens       Date:  2021-04-27

10.  Prophage sequences defining hot spots of genome variation in Salmonella enterica serovar Typhimurium can be used to discriminate between field isolates.

Authors:  Fiona J Cooke; John Wain; Maria Fookes; Alasdair Ivens; Nicholas Thomson; Derek J Brown; E John Threlfall; George Gunn; Geoffrey Foster; Gordon Dougan
Journal:  J Clin Microbiol       Date:  2007-05-23       Impact factor: 5.948
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