Literature DB >> 15063647

Protein structure prediction using Rosetta.

Carol A Rohl1, Charlie E M Strauss, Kira M S Misura, David Baker.   

Abstract

Year:  2004        PMID： 15063647     DOI： 10.1016/S0076-6879(04)83004-0

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN： 0076-6879            Impact factor:   1.600


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  589 in total

1.  A generalized approach to sampling backbone conformations with RosettaDock for CAPRI rounds 13-19.

Authors:  Aroop Sircar; Sidhartha Chaudhury; Krishna Praneeth Kilambi; Monica Berrondo; Jeffrey J Gray
Journal:  Proteins       Date:  2010-11-15

2.  Optimization of the in-silico-designed kemp eliminase KE70 by computational design and directed evolution.

Authors:  Olga Khersonsky; Daniela Röthlisberger; Andrew M Wollacott; Paul Murphy; Orly Dym; Shira Albeck; Gert Kiss; K N Houk; David Baker; Dan S Tawfik
Journal:  J Mol Biol       Date:  2011-01-28       Impact factor: 5.469

3.  Sequence, structure, and function of peptide self-assembled monolayers.

Authors:  Ann K Nowinski; Fang Sun; Andrew D White; Andrew J Keefe; Shaoyi Jiang
Journal:  J Am Chem Soc       Date:  2012-03-22       Impact factor: 15.419

4.  Capture and imaging of a prehairpin fusion intermediate of the paramyxovirus PIV5.

Authors:  Yong Ho Kim; Jason E Donald; Gevorg Grigoryan; George P Leser; Alexander Y Fadeev; Robert A Lamb; William F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-16       Impact factor: 11.205

5.  Creating novel protein scripts beyond natural alphabets.

Authors:  Anil Kumar; Vibin Ramakrishnan
Journal:  Syst Synth Biol       Date:  2011-03-01

6.  An enumerative stepwise ansatz enables atomic-accuracy RNA loop modeling.

Authors:  Parin Sripakdeevong; Wipapat Kladwang; Rhiju Das
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

7.  Determinants of Endoplasmic Reticulum-to-Lipid Droplet Protein Targeting.

Authors:  Maria-Jesus Olarte; Siyoung Kim; Morris E Sharp; Jessica M J Swanson; Robert V Farese; Tobias C Walther
Journal:  Dev Cell       Date:  2020-07-29       Impact factor: 12.270

8.  Characterization of a protective Escherichia coli-expressed Plasmodium falciparum merozoite surface protein 3 indicates a non-linear, multi-domain structure.

Authors:  Chiawei W Tsai; Peter F Duggan; Albert J Jin; Nicholas J Macdonald; Svetlana Kotova; Jacob Lebowitz; Darrell E Hurt; Richard L Shimp; Lynn Lambert; Louis H Miller; Carole A Long; Allan Saul; David L Narum
Journal:  Mol Biochem Parasitol       Date:  2008-11-27       Impact factor: 1.759

9.  Solvent accessible surface area approximations for rapid and accurate protein structure prediction.

Authors:  Elizabeth Durham; Brent Dorr; Nils Woetzel; René Staritzbichler; Jens Meiler
Journal:  J Mol Model       Date:  2009-02-21       Impact factor: 1.810

10.  Models for the a subunits of the Thermus thermophilus V/A-ATPase and Saccharomyces cerevisiae V-ATPase enzymes by cryo-EM and evolutionary covariance.

Authors:  Daniel G Schep; Jianhua Zhao; John L Rubinstein
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-07       Impact factor: 11.205
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