Literature DB >> 15058386

An ecological perspective on bacterial biodiversity.

M Claire Horner-Devine1, Karen M Carney, Brendan J M Bohannan.   

Abstract

Bacteria may be one of the most abundant and species-rich groups of organisms, and they mediate many critical ecosystem processes. Despite the ecological importance of bacteria, past practical and theoretical constraints have limited our ability to document patterns of bacterial diversity and to understand the processes that determine these patterns. However, recent advances in molecular techniques that allow more thorough detection of bacteria in nature have made it possible to examine such patterns and processes. Here, we review recent studies of the distribution of free-living bacterial diversity and compare our current understanding with what is known about patterns in plant and animal diversity. From these recent studies a preliminary picture is emerging: bacterial diversity may exhibit regular patterns, and in some cases these patterns may be qualitatively similar to those observed for plants and animals.

Mesh:

Year:  2004        PMID: 15058386      PMCID: PMC1691570          DOI: 10.1098/rspb.2003.2549

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  70 in total

1.  The emergence and maintenance of diversity: insights from experimental bacterial populations.

Authors: 
Journal:  Trends Ecol Evol       Date:  2000-06       Impact factor: 17.712

2.  Comparison of soil bacterial communities in rhizospheres of three plant species and the interspaces in an arid grassland.

Authors:  Cheryl R Kuske; Lawrence O Ticknor; Mark E Miller; John M Dunbar; Jody A Davis; Susan M Barns; Jayne Belnap
Journal:  Appl Environ Microbiol       Date:  2002-04       Impact factor: 4.792

3.  Diversity peaks at intermediate productivity in a laboratory microcosm.

Authors:  R Kassen; A Buckling; G Bell; P B Rainey
Journal:  Nature       Date:  2000-08-03       Impact factor: 49.962

4.  Relationship between spatial and genetic distance in Agrobacterium spp. in 1 cubic centimeter of soil.

Authors:  J Vogel; P Normand; J Thioulouse; X Nesme; G L Grundmann
Journal:  Appl Environ Microbiol       Date:  2003-03       Impact factor: 4.792

5.  Local dispersal promotes biodiversity in a real-life game of rock-paper-scissors.

Authors:  Benjamin Kerr; Margaret A Riley; Marcus W Feldman; Brendan J M Bohannan
Journal:  Nature       Date:  2002-07-11       Impact factor: 49.962

6.  Adaptive radiation in a heterogeneous environment.

Authors:  P B Rainey; M Travisano
Journal:  Nature       Date:  1998-07-02       Impact factor: 49.962

Review 7.  Novel techniques for analysing microbial diversity in natural and perturbed environments.

Authors:  V Torsvik; F L Daae; R A Sandaa; L Ovreås
Journal:  J Biotechnol       Date:  1998-09-17       Impact factor: 3.307

8.  Discovery and classification of ecological diversity in the bacterial world: the role of DNA sequence data.

Authors:  T Palys; L K Nakamura; F M Cohan
Journal:  Int J Syst Bacteriol       Date:  1997-10

9.  Horizontal spread of mer operons among gram-positive bacteria in natural environments.

Authors:  E S Bogdanova; I A Bass; L S Minakhin; M A Petrova; S Z Mindlin; A A Volodin; E S Kalyaeva; J M Tiedje; J L Hobman; N L Brown; V G Nikiforov
Journal:  Microbiology (Reading)       Date:  1998-03       Impact factor: 2.777

10.  Hierarchical analysis of linkage disequilibrium in Rhizobium populations: evidence for sex?

Authors:  V Souza; T T Nguyen; R R Hudson; D Piñero; R E Lenski
Journal:  Proc Natl Acad Sci U S A       Date:  1992-09-01       Impact factor: 11.205

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  81 in total

1.  Low pore connectivity increases bacterial diversity in soil.

Authors:  Jennifer K Carson; Vanesa Gonzalez-Quiñones; Daniel V Murphy; Christoph Hinz; Jeremy A Shaw; Deirdre B Gleeson
Journal:  Appl Environ Microbiol       Date:  2010-04-23       Impact factor: 4.792

2.  Soil resources influence spatial patterns of denitrifying communities at scales compatible with land management.

Authors:  Karin Enwall; Ingela N Throbäck; Maria Stenberg; Mats Söderström; Sara Hallin
Journal:  Appl Environ Microbiol       Date:  2010-01-29       Impact factor: 4.792

3.  Balance of neutral and deterministic components in the dynamics of activated sludge floc assembly.

Authors:  Joaquín M Ayarza; Leonardo Erijman
Journal:  Microb Ecol       Date:  2010-10-23       Impact factor: 4.552

4.  Energetics of the smallest: Do bacteria breathe at the same rate as whales?

Authors:  Anastassia M Makarieva; Victor G Gorshkov; Bai-Lian Li
Journal:  Proc Biol Sci       Date:  2005-10-22       Impact factor: 5.349

5.  Sediment resuspension effects on the benthic microbial loop in experimental microcosms.

Authors:  Antonio Pusceddu; Carla Fiordelmondo; Roberto Danovaro
Journal:  Microb Ecol       Date:  2005-12-15       Impact factor: 4.552

6.  Indirect effects and spatial scaling affect the persistence of multispecies metapopulations.

Authors:  Michael B Bonsall; James C Bull; Nicola J Pickup; Michael P Hassell
Journal:  Proc Biol Sci       Date:  2005-07-22       Impact factor: 5.349

Review 7.  Captured diversity in a culture collection: case study of the geographic and habitat distributions of environmental isolates held at the american type culture collection.

Authors:  Melissa Merrill Floyd; Jane Tang; Matthew Kane; David Emerson
Journal:  Appl Environ Microbiol       Date:  2005-06       Impact factor: 4.792

8.  Geographic and environmental sources of variation in lake bacterial community composition.

Authors:  Anthony C Yannarell; Eric W Triplett
Journal:  Appl Environ Microbiol       Date:  2005-01       Impact factor: 4.792

9.  Population dynamics within a microbial consortium during growth on diesel fuel in saline environments.

Authors:  Sabine Kleinsteuber; Volker Riis; Ingo Fetzer; Hauke Harms; Susann Müller
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

10.  Predictable bacterial composition and hydrocarbon degradation in Arctic soils following diesel and nutrient disturbance.

Authors:  Terrence H Bell; Etienne Yergeau; Christine Maynard; David Juck; Lyle G Whyte; Charles W Greer
Journal:  ISME J       Date:  2013-02-07       Impact factor: 10.302

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