Literature DB >> 15043924

HIV Rev self-assembly is linked to a molten-globule to compact structural transition.

Rajendran Surendran1, Petr Herman, Zhijie Cheng, Thomas J Daly, J Ching Lee.   

Abstract

By regulating the differential expression of proviral pre mRNA in the host cell, Rev plays a crucial role in the HIV-1 life cycle. The capacity of Rev to function is intimately linked to its ability to self-associate. Nevertheless, little is known about the exact role of self-association in the molecular mechanism defining its biological activity. A prerequisite knowledge is a definition of the molecular events undertaken by Rev during the process of self-assembly. Thus, this study was initiated to monitor the structure of Rev as a function of protein concentration. Rev undergoes a structural transition as a consequence of self-assembly. This structural transition was monitored by three spectroscopic methods. The accessibility of the single tryptophan in Rev monomer to acrylamide quenching increases with decreasing protein concentration. At very low concentration of Rev, the tryptophan accessibility is close to that of an unfolded Rev. As evaluated by circular dichroism, the secondary structure of Rev is protein concentration dependent as evidenced by an increase in the magnitude of ellipticity with increasing protein concentration. Further, results from ANS binding studies indicate that the ANS binding sites in Rev experience an apparent increase in hydrophobicity as the Rev concentration was increased. These concentration dependent changes seem to reach a maximum above 5 microM Rev monomer concentration. In order to define the mode of Rev self-association sedimentation velocity and equilibrium experiments were conducted. There are evidently two consecutive progressive association processes. At protein concentrations below 0.5 mg/ml, the data from sedimentation studies can be fitted to a single isodesmic model. Simulation of velocity sedimentation profile indicates that free Rev monomer that has not entered into the association processes can best be described to exhibit a value of S(20,w) that is substantially smaller than 1.4 S, a value needed to fit the rest of the data. The latter value is consistent for a Rev monomer with the expected molecules weight and if it were to assume a compact globular shape. These spectroscopic and hydrodynamic results imply that monomeric Rev is in a molten globule state, which becomes more compact upon self-association.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15043924     DOI: 10.1016/j.bpc.2003.10.013

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  8 in total

1.  Analytical ultracentrifugation: sedimentation velocity and sedimentation equilibrium.

Authors:  James L Cole; Jeffrey W Lary; Thomas P Moody; Thomas M Laue
Journal:  Methods Cell Biol       Date:  2008       Impact factor: 1.441

2.  The arginine-rich RNA-binding motif of HIV-1 Rev is intrinsically disordered and folds upon RRE binding.

Authors:  Fabio Casu; Brendan M Duggan; Mirko Hennig
Journal:  Biophys J       Date:  2013-08-20       Impact factor: 4.033

3.  Rapid and efficient purification of RNA-binding proteins: application to HIV-1 Rev.

Authors:  Marco Marenchino; David W Armbruster; Mirko Hennig
Journal:  Protein Expr Purif       Date:  2008-09-25       Impact factor: 1.650

4.  Formation of trans-activation competent HIV-1 Rev:RRE complexes requires the recruitment of multiple protein activation domains.

Authors:  Dirk Hoffmann; Doreen Schwarck; Carina Banning; Matthias Brenner; Lakshmikanth Mariyanna; Marcel Krepstakies; Michael Schindler; David P Millar; Joachim Hauber
Journal:  PLoS One       Date:  2012-06-04       Impact factor: 3.240

5.  PRMT6 diminishes HIV-1 Rev binding to and export of viral RNA.

Authors:  Cédric F Invernizzi; Baode Xie; Stéphane Richard; Mark A Wainberg
Journal:  Retrovirology       Date:  2006-12-18       Impact factor: 4.602

6.  Thermodynamic instability of viral proteins is a pathogen-associated molecular pattern targeted by human defensins.

Authors:  Elena Kudryashova; Pratibha C Koneru; Mamuka Kvaratskhelia; Adam A Strömstedt; Wuyuan Lu; Dmitri S Kudryashov
Journal:  Sci Rep       Date:  2016-09-01       Impact factor: 4.379

7.  Is unphosphorylated Rex, as multifunctional protein of HTLV-1, a fully intrinsically disordered protein? An in silico study.

Authors:  Mitra Kheirabadi; Majid Taghdir
Journal:  Biochem Biophys Rep       Date:  2016-08-04

Review 8.  Intrinsically disordered proteins of viruses: Involvement in the mechanism of cell regulation and pathogenesis.

Authors:  Pushpendra Mani Mishra; Navneet Chandra Verma; Chethana Rao; Vladimir N Uversky; Chayan Kanti Nandi
Journal:  Prog Mol Biol Transl Sci       Date:  2020-04-02       Impact factor: 3.622

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.