Literature DB >> 15039583

Expression, purification, crystallization and preliminary diffraction studies of the tRNA pseudouridine synthase TruD from Escherichia coli.

Ulrika B Ericsson1, Martin E Andersson, Benita Engvall, Pär Nordlund, B Martin Hallberg.   

Abstract

Pseudouridine, the 5-ribosyl isomer of uridine, is the most common modification of structural RNA. The recently identified pseudouridine synthase TruD belongs to a widespread class of pseudouridine synthases without significant sequence homology to previously known families. TruD from Escherichia coli was overexpressed, purified and crystallized. The crystals diffract to a minimum Bragg spacing of 2.4 A and belong to space group P2(1)2(1)2(1), with unit-cell parameters a = 63.4, b = 108.6, c = 111.7 A.

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Year:  2004        PMID: 15039583     DOI: 10.1107/S0907444904003506

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  4 in total

1.  Crystal structure of the highly divergent pseudouridine synthase TruD reveals a circular permutation of a conserved fold.

Authors:  Charmaine Hoang; Adrian R Ferre-D'Amare
Journal:  RNA       Date:  2004-07       Impact factor: 4.942

Review 2.  Discovery, properties, and biosynthesis of pseudouridimycin, an antibacterial nucleoside-analog inhibitor of bacterial RNA polymerase.

Authors:  Sonia I Maffioli; Margherita Sosio; Richard H Ebright; Stefano Donadio
Journal:  J Ind Microbiol Biotechnol       Date:  2018-11-21       Impact factor: 3.346

3.  The human pseudouridine synthase PUS7 recognizes RNA with an extended multi-domain binding surface.

Authors:  Julia Guegueniat; Levon Halabelian; Hong Zeng; Aiping Dong; Yanjun Li; Hong Wu; Cheryl H Arrowsmith; Ute Kothe
Journal:  Nucleic Acids Res       Date:  2021-11-18       Impact factor: 16.971

4.  Analysis of the Pseudouridimycin Biosynthetic Pathway Provides Insights into the Formation of C-nucleoside Antibiotics.

Authors:  Margherita Sosio; Eleonora Gaspari; Marianna Iorio; Silvia Pessina; Marnix H Medema; Alice Bernasconi; Matteo Simone; Sonia I Maffioli; Richard H Ebright; Stefano Donadio
Journal:  Cell Chem Biol       Date:  2018-03-15       Impact factor: 8.116

  4 in total

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