Literature DB >> 15037242

Crystal structure of the AAA+ alpha domain of E. coli Lon protease at 1.9A resolution.

Istvan Botos1, Edward E Melnikov, Scott Cherry, Anna G Khalatova, Fatima S Rasulova, Joseph E Tropea, Michael R Maurizi, Tatyana V Rotanova, Alla Gustchina, Alexander Wlodawer.   

Abstract

The crystal structure of the small, mostly helical alpha domain of the AAA+ module of the Escherichia coli ATP-dependent protease Lon has been solved by single isomorphous replacement combined with anomalous scattering and refined at 1.9A resolution to a crystallographic R factor of 17.9%. This domain, comprising residues 491-584, was obtained by chymotrypsin digestion of the recombinant full-length protease. The alpha domain of Lon contains four alpha helices and two parallel strands and resembles similar domains found in a variety of ATPases and helicases, including the oligomeric proteases HslVU and ClpAP. The highly conserved "sensor-2" Arg residue is located at the beginning of the third helix. Detailed comparison with the structures of 11 similar domains established the putative location of the nucleotide-binding site in this first fragment of Lon for which a crystal structure has become available.

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Year:  2004        PMID: 15037242     DOI: 10.1016/j.jsb.2003.09.003

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  24 in total

1.  Crystal structure of Lon protease: molecular architecture of gated entry to a sequestered degradation chamber.

Authors:  Sun-Shin Cha; Young Jun An; Chang Ro Lee; Hyun Sook Lee; Yeon-Gil Kim; Sang Jin Kim; Kae Kyoung Kwon; Gian Marco De Donatis; Jung-Hyun Lee; Michael R Maurizi; Sung Gyun Kang
Journal:  EMBO J       Date:  2010-09-10       Impact factor: 11.598

2.  Structure of the N-terminal fragment of Escherichia coli Lon protease.

Authors:  Mi Li; Alla Gustchina; Fatima S Rasulova; Edward E Melnikov; Michael R Maurizi; Tatyana V Rotanova; Zbigniew Dauter; Alexander Wlodawer
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-07-09

3.  Identification of the proteasome inhibitor MG262 as a potent ATP-dependent inhibitor of the Salmonella enterica serovar Typhimurium Lon protease.

Authors:  Hilary Frase; Jason Hudak; Irene Lee
Journal:  Biochemistry       Date:  2006-07-11       Impact factor: 3.162

Review 4.  Slicing a protease: structural features of the ATP-dependent Lon proteases gleaned from investigations of isolated domains.

Authors:  Tatyana V Rotanova; Istvan Botos; Edward E Melnikov; Fatima Rasulova; Alla Gustchina; Michael R Maurizi; Alexander Wlodawer
Journal:  Protein Sci       Date:  2006-08       Impact factor: 6.725

5.  Single-turnover kinetic experiments confirm the existence of high- and low-affinity ATPase sites in Escherichia coli Lon protease.

Authors:  Diana Vineyard; Jessica Patterson-Ward; Irene Lee
Journal:  Biochemistry       Date:  2006-04-11       Impact factor: 3.162

6.  Crystallization and preliminary X-ray crystallographic analysis of Lon from Thermococcus onnurineus NA1.

Authors:  Young Jun An; Chang-Ro Lee; Supangat Supangat; Hyun Sook Lee; Jung-Hyun Lee; Sung Gyun Kang; Sun-Shin Cha
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-12-25

7.  A redox switch shapes the Lon protease exit pore to facultatively regulate proteolysis.

Authors:  Wataru Nishii; Mutsuko Kukimoto-Niino; Takaho Terada; Mikako Shirouzu; Tomonari Muramatsu; Masaki Kojima; Hiroshi Kihara; Shigeyuki Yokoyama
Journal:  Nat Chem Biol       Date:  2014-11-10       Impact factor: 15.040

8.  Mitochondrial LON protease-dependent degradation of cytochrome c oxidase subunits under hypoxia and myocardial ischemia.

Authors:  Naresh B V Sepuri; Rajesh Angireddy; Satish Srinivasan; Manti Guha; Joseph Spear; Bin Lu; Hindupur K Anandatheerthavarada; Carolyn K Suzuki; Narayan G Avadhani
Journal:  Biochim Biophys Acta Bioenerg       Date:  2017-04-23       Impact factor: 3.991

9.  Cryo-EM structure of dodecameric Vps4p and its 2:1 complex with Vta1p.

Authors:  Zhiheng Yu; Malgorzata D Gonciarz; Wesley I Sundquist; Christopher P Hill; Grant J Jensen
Journal:  J Mol Biol       Date:  2008-01-12       Impact factor: 5.469

Review 10.  Functional mechanics of the ATP-dependent Lon protease- lessons from endogenous protein and synthetic peptide substrates.

Authors:  Irene Lee; Carolyn K Suzuki
Journal:  Biochim Biophys Acta       Date:  2008-03-05
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