Literature DB >> 15037240

Broad yet high substrate specificity: the challenge of AAA+ proteins.

Axel Mogk1, David Dougan, Jimena Weibezahn, Christian Schlieker, Kursad Turgay, Bernd Bukau.   

Abstract

AAA+ proteins remodel target substrates in an ATP-dependent manner, an activity that is of central importance for a plethora of cellular processes. While sharing a similar hexameric structure AAA+ proteins must exhibit differences in substrate recognition to fulfil their diverse biological functions. Here we describe strategies of AAA+ proteins to ensure substrate specificity. AAA domains can directly mediate substrate recognition, however, in general extra domains, added to the core AAA domain, control substrate interaction. Such extra domains may either directly recognize substrates or serve as a platform for adaptor proteins, which transfer bound substrates to their AAA+ partner proteins. The positioning of adaptor proteins in substrate recognition can enable them to control the activity of their partner proteins by coupling AAA+ protein activation to substrate availability.

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Year:  2004        PMID: 15037240     DOI: 10.1016/j.jsb.2003.10.009

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  16 in total

1.  Binding of the ClpA unfoldase opens the axial gate of ClpP peptidase.

Authors:  Grégory Effantin; Michael R Maurizi; Alasdair C Steven
Journal:  J Biol Chem       Date:  2010-03-16       Impact factor: 5.157

2.  Structural basis of mycobacterial inhibition by cyclomarin A.

Authors:  Dileep Vasudevan; Srinivasa P S Rao; Christian G Noble
Journal:  J Biol Chem       Date:  2013-09-10       Impact factor: 5.157

3.  Substrate recognition by AAA+ ATPases: distinct substrate binding modes in ATP-dependent protease Yme1 of the mitochondrial intermembrane space.

Authors:  Martin Graef; Georgeta Seewald; Thomas Langer
Journal:  Mol Cell Biol       Date:  2007-01-29       Impact factor: 4.272

4.  Localization of functional polypeptides in bacterial inclusion bodies.

Authors:  Elena García-Fruitós; Anna Arís; Antonio Villaverde
Journal:  Appl Environ Microbiol       Date:  2006-11-03       Impact factor: 4.792

5.  The slow Wallerian degeneration protein, WldS, binds directly to VCP/p97 and partially redistributes it within the nucleus.

Authors:  Heike Laser; Laura Conforti; Giacomo Morreale; Till G M Mack; Molly Heyer; Jane E Haley; Thomas M Wishart; Bogdan Beirowski; Simon A Walker; Georg Haase; Arzu Celik; Robert Adalbert; Diana Wagner; Daniela Grumme; Richard R Ribchester; Markus Plomann; Michael P Coleman
Journal:  Mol Biol Cell       Date:  2005-12-21       Impact factor: 4.138

6.  ATP-dependent proteases differ substantially in their ability to unfold globular proteins.

Authors:  Prakash Koodathingal; Neil E Jaffe; Daniel A Kraut; Sumit Prakash; Susan Fishbain; Christophe Herman; Andreas Matouschek
Journal:  J Biol Chem       Date:  2009-04-21       Impact factor: 5.157

Review 7.  Mitochondrial turnover and aging of long-lived postmitotic cells: the mitochondrial-lysosomal axis theory of aging.

Authors:  Alexei Terman; Tino Kurz; Marian Navratil; Edgar A Arriaga; Ulf T Brunk
Journal:  Antioxid Redox Signal       Date:  2010-04       Impact factor: 8.401

8.  Remodeling of a delivery complex allows ClpS-mediated degradation of N-degron substrates.

Authors:  Izarys Rivera-Rivera; Giselle Román-Hernández; Robert T Sauer; Tania A Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-03       Impact factor: 11.205

9.  Structural and motional contributions of the Bacillus subtilis ClpC N-domain to adaptor protein interactions.

Authors:  Douglas J Kojetin; Patrick D McLaughlin; Richele J Thompson; David Dubnau; Peter Prepiak; Mark Rance; John Cavanagh
Journal:  J Mol Biol       Date:  2009-01-30       Impact factor: 5.469

10.  ATP-independent reversal of a membrane protein aggregate by a chloroplast SRP subunit.

Authors:  Peera Jaru-Ampornpan; Kuang Shen; Vinh Q Lam; Mona Ali; Sebastian Doniach; Tony Z Jia; Shu-Ou Shan
Journal:  Nat Struct Mol Biol       Date:  2010-04-27       Impact factor: 15.369

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