Literature DB >> 15025575

Assignment of the appaloosa coat colour gene (LP) to equine chromosome 1.

R B Terry1, S Archer, S Brooks, D Bernoco, E Bailey.   

Abstract

A single autosomal dominant locus, leopard complex (LP) controls the presence of appaloosa pigmentation patterns in the horse. The causative gene for LP is unknown. This study was undertaken to map LP in the horse. Two paternal half sib families segregating for the LP locus and including a total of 47 offspring were used to perform a genome scan which localized LP to horse chromosome 1 (ECA1). LP was linked to ASB08 (LOD = 9.99 at Theta = 0.02) and AHT21 (LOD = 5.03 at Theta = 0.14). To refine the map position of LP, eight microsatellite markers on ECA1 (UM041, LEX77, 1CA41, TKY374, COR046, 1CA32, 1CA43, and TKY002) were analysed in the two half sib families. Results from this linkage analysis showed LP was located in the interval between ASB08 and 1CA43. Tight junction protein (TJP1), which lies within the LP interval on ECA1, was used to determine the homologous chromosomes in humans (HSA15) and mice (mouse chromosome 7). We propose that the pink eyed dilution (p) gene and transient receptor potential cation channel subfamily M, member 1 (TRPM1) are positional candidate genes for LP.

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Year:  2004        PMID: 15025575     DOI: 10.1111/j.1365-2052.2004.01113.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN: 0268-9146            Impact factor:   3.169


  11 in total

1.  Genotypes of predomestic horses match phenotypes painted in Paleolithic works of cave art.

Authors:  Melanie Pruvost; Rebecca Bellone; Norbert Benecke; Edson Sandoval-Castellanos; Michael Cieslak; Tatyana Kuznetsova; Arturo Morales-Muñiz; Terry O'Connor; Monika Reissmann; Michael Hofreiter; Arne Ludwig
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-07       Impact factor: 11.205

2.  Exon skipping in the KIT gene causes a Sabino spotting pattern in horses.

Authors:  Samantha A Brooks; Ernest Bailey
Journal:  Mamm Genome       Date:  2005-11-11       Impact factor: 2.957

3.  Twenty-five thousand years of fluctuating selection on leopard complex spotting and congenital night blindness in horses.

Authors:  Arne Ludwig; Monika Reissmann; Norbert Benecke; Rebecca Bellone; Edson Sandoval-Castellanos; Michael Cieslak; Gloria G Fortes; Arturo Morales-Muñiz; Michael Hofreiter; Melanie Pruvost
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-01-19       Impact factor: 6.237

4.  Differential gene expression of TRPM1, the potential cause of congenital stationary night blindness and coat spotting patterns (LP) in the Appaloosa horse (Equus caballus).

Authors:  Rebecca R Bellone; Samantha A Brooks; Lynne Sandmeyer; Barbara A Murphy; George Forsyth; Sheila Archer; Ernest Bailey; Bruce Grahn
Journal:  Genetics       Date:  2008-07-27       Impact factor: 4.562

Review 5.  The horse genome derby: racing from map to whole genome sequence.

Authors:  Bhanu P Chowdhary; Terje Raudsepp
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

6.  Whole-genome linkage disequilibrium screening for complex traits in horses.

Authors:  Teruaki Tozaki; Kei-ichi Hirota; Telhisa Hasegawa; Nobushige Ishida; Takashi Tobe
Journal:  Mol Genet Genomics       Date:  2007-02-22       Impact factor: 2.980

7.  Coat Color Roan Shows Association with KIT Variants and No Evidence of Lethality in Icelandic Horses.

Authors:  Katharina Voß; Julia Tetens; Georg Thaller; Doreen Becker
Journal:  Genes (Basel)       Date:  2020-06-22       Impact factor: 4.096

8.  Genome-wide analysis reveals selection for important traits in domestic horse breeds.

Authors:  Jessica L Petersen; James R Mickelson; Aaron K Rendahl; Stephanie J Valberg; Lisa S Andersson; Jeanette Axelsson; Ernie Bailey; Danika Bannasch; Matthew M Binns; Alexandre S Borges; Pieter Brama; Artur da Câmara Machado; Stefano Capomaccio; Katia Cappelli; E Gus Cothran; Ottmar Distl; Laura Fox-Clipsham; Kathryn T Graves; Gérard Guérin; Bianca Haase; Telhisa Hasegawa; Karin Hemmann; Emmeline W Hill; Tosso Leeb; Gabriella Lindgren; Hannes Lohi; Maria Susana Lopes; Beatrice A McGivney; Sofia Mikko; Nicholas Orr; M Cecilia T Penedo; Richard J Piercy; Marja Raekallio; Stefan Rieder; Knut H Røed; June Swinburne; Teruaki Tozaki; Mark Vaudin; Claire M Wade; Molly E McCue
Journal:  PLoS Genet       Date:  2013-01-17       Impact factor: 5.917

9.  Lrit3 deficient mouse (nob6): a novel model of complete congenital stationary night blindness (cCSNB).

Authors:  Marion Neuillé; Said El Shamieh; Elise Orhan; Christelle Michiels; Aline Antonio; Marie-Elise Lancelot; Christel Condroyer; Kinga Bujakowska; Olivier Poch; José-Alain Sahel; Isabelle Audo; Christina Zeitz
Journal:  PLoS One       Date:  2014-03-05       Impact factor: 3.240

10.  Evidence for a retroviral insertion in TRPM1 as the cause of congenital stationary night blindness and leopard complex spotting in the horse.

Authors:  Rebecca R Bellone; Heather Holl; Vijayasaradhi Setaluri; Sulochana Devi; Nityanand Maddodi; Sheila Archer; Lynne Sandmeyer; Arne Ludwig; Daniel Foerster; Melanie Pruvost; Monika Reissmann; Ralf Bortfeldt; David L Adelson; Sim Lin Lim; Janelle Nelson; Bianca Haase; Martina Engensteiner; Tosso Leeb; George Forsyth; Michael J Mienaltowski; Padmanabhan Mahadevan; Michael Hofreiter; Johanna L A Paijmans; Gloria Gonzalez-Fortes; Bruce Grahn; Samantha A Brooks
Journal:  PLoS One       Date:  2013-10-22       Impact factor: 3.240

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