Literature DB >> 15020829

Retrofitting BACs and PACs with LoxP transposons to generate nested deletions.

Pradeep K Chatterjee1.   

Abstract

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Year:  2004        PMID： 15020829     DOI： 10.1385/1-59259-752-1:231

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


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  7 in total

1.  Mutually exclusive recombination of wild-type and mutant loxP sites in vivo facilitates transposon-mediated deletions from both ends of genomic DNA in PACs.

Authors:  Pradeep K Chatterjee; Leighcraft A Shakes; Deepak K Srivastava; Douglas M Garland; Ken R Harewood; Kyle J Moore; Jonathon S Coren
Journal:  Nucleic Acids Res       Date:  2004-10-19       Impact factor: 16.971

2.  Identifying Distal cis-acting Gene-Regulatory Sequences by Expressing BACs Functionalized with loxP-Tn10 Transposons in Zebrafish.

Authors:  Pradeep K Chatterjee; Leighcraft A Shakes; Hope M Wolf; Mohammad A Mujalled; Constance Zhou; Charles Hatcher; Derek C Norford
Journal:  RSC Adv       Date:  2013-06-21       Impact factor: 3.361

3.  Replacing the wild type loxP site in BACs from the public domain with lox66 using a lox66 transposon.

Authors:  Pradeep K Chatterjee; Leighcraft A Shakes; Naima Stennett; Vanessa L Richardson; Tennison L Malcolm; Ken R Harewood
Journal:  BMC Res Notes       Date:  2010-02-19

4.  Generating libraries of iTol2-end insertions at BAC ends using loxP and lox511 Tn10 transposons.

Authors:  Leighcraft A Shakes; Gembu Abe; Mugtaba A Eltayeb; Hope M Wolf; Koichi Kawakami; Pradeep K Chatterjee
Journal:  BMC Genomics       Date:  2011-07-07       Impact factor: 3.969

5.  Using BAC transgenesis in zebrafish to identify regulatory sequences of the amyloid precursor protein gene in humans.

Authors:  Leighcraft A Shakes; Hansen Du; Hope M Wolf; Charles Hatcher; Derek C Norford; Patricia Precht; Ranjan Sen; Pradeep K Chatterjee
Journal:  BMC Genomics       Date:  2012-09-04       Impact factor: 3.969

6.  Minimal cross-recombination between wild-type and loxP511 sites in vivo facilitates truncating both ends of large DNA inserts in pBACe3.6 and related vectors.

Authors:  Leighcraft A Shakes; Douglas M Garland; Deepak K Srivastava; Ken R Harewood; Pradeep K Chatterjee
Journal:  Nucleic Acids Res       Date:  2005-08-01       Impact factor: 16.971

7.  Context dependent function of APPb enhancer identified using enhancer trap-containing BACs as transgenes in zebrafish.

Authors:  Leighcraft A Shakes; Tennison L Malcolm; Kevin L Allen; Supriyo De; Ken R Harewood; Pradeep K Chatterjee
Journal:  Nucleic Acids Res       Date:  2008-10-01       Impact factor: 16.971
  7 in total

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