Literature DB >> 15014163

The considerable genome size variation of Hordeum species (poaceae) is linked to phylogeny, life form, ecology, and speciation rates.

Sabine S Jakob1, Armin Meister, Frank R Blattner.   

Abstract

Genome size variation in plants is thought to be correlated with cytological, physiological, or ecological characters. However, conclusions drawn in several studies were often contradictory. To analyze nuclear genome size evolution in a phylogenetic framework, DNA contents of 134 accessions, representing all but one species of the barley genus Hordeum L., were measured by flow cytometry. The 2C DNA contents were in a range from 6.85 to 10.67 pg in diploids (2n = 14) and reached up to 29.85 pg in hexaploid species (2n = 42). The smallest genomes were found in taxa from the New World, which became secondarily annual, whereas the largest diploid genomes occur in Eurasian annuals. Genome sizes of polyploid taxa equaled mostly the added sizes of their proposed progenitors or were slightly (1% to 5%) smaller. The analysis of ancestral genome sizes on the base of the phylogeny of the genus revealed lineages with decreasing and with increasing genome sizes. Correlations of intraspecific genome size variation with the length of vegetation period were found in H. marinum populations from Western Europe but were not significant within two species from South America. On a higher taxonomical level (i.e., for species groups or the entire genus), environmental correlations were absent. This could mostly be attributed to the superimposition of life-form changes and phylogenetic constraints, which conceal ecogeographical correlations.

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Year:  2004        PMID: 15014163     DOI: 10.1093/molbev/msh092

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  32 in total

1.  Single primer amplification reaction methods reveal exotic and indigenous mulberry varieties are similarly diverse.

Authors:  Esha Bhattacharya; S B Dandin; Shirish Anand Ranade
Journal:  J Biosci       Date:  2005-12       Impact factor: 1.826

2.  Intraspecific DNA content variability in Festuca pallens on different geographical scales and ploidy levels.

Authors:  Petr Smarda; Petr Bures
Journal:  Ann Bot       Date:  2006-07-24       Impact factor: 4.357

3.  The ups and downs of genome size evolution in polyploid species of Nicotiana (Solanaceae).

Authors:  I J Leitch; L Hanson; K Y Lim; A Kovarik; M W Chase; J J Clarkson; A R Leitch
Journal:  Ann Bot       Date:  2008-01-24       Impact factor: 4.357

4.  Random distribution pattern and non-adaptivity of genome size in a highly variable population of Festuca pallens.

Authors:  Petr Smarda; Petr Bures; Lucie Horová
Journal:  Ann Bot       Date:  2007-06-12       Impact factor: 4.357

5.  Genome size in Hieracium subgenus Hieracium (Asteraceae) is strongly correlated with major phylogenetic groups.

Authors:  Jindrich Chrtek; Jaroslav Zahradnícek; Karol Krak; Judith Fehrer
Journal:  Ann Bot       Date:  2009-05-11       Impact factor: 4.357

6.  Nuclear DNA content in some species of Lessingianthus (Vernonieae, Asteraceae) by flow cytometry.

Authors:  María B Angulo; Massimiliano Dematteis
Journal:  J Plant Res       Date:  2012-12-02       Impact factor: 2.629

7.  DNA content in South American endemic species of Lathyrus.

Authors:  Laura Chalup; Marina Grabiele; Viviana Solís Neffa; Guillermo Seijo
Journal:  J Plant Res       Date:  2014-05-20       Impact factor: 2.629

8.  Fine-scale comparative genetic and physical mapping supports map-based cloning strategies for the self-incompatibility loci of perennial ryegrass (Lolium perenne L.).

Authors:  Hiroshi Shinozuka; Noel O I Cogan; Kevin F Smith; German C Spangenberg; John W Forster
Journal:  Plant Mol Biol       Date:  2009-11-27       Impact factor: 4.076

9.  Cytogeography and genome size variation in the Claytonia perfoliata (Portulacaceae) polyploid complex.

Authors:  Patrick J McIntyre
Journal:  Ann Bot       Date:  2012-09-07       Impact factor: 4.357

10.  The evolutionary history of sea barley (Hordeum marinum) revealed by comparative physical mapping of repetitive DNA.

Authors:  Alejandro Carmona; Eva Friero; Alfredo de Bustos; Nicolás Jouve; Angeles Cuadrado
Journal:  Ann Bot       Date:  2013-11-05       Impact factor: 4.357

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