Literature DB >> 15010305

The heparin-Ca(2+) interaction: the influence of the O-sulfation pattern on binding.

Franck Chevalier1, Ricardo Lucas, Jesús Angulo, Manuel Martin-Lomas, Pedro M Nieto.   

Abstract

The specific binding of Ca(2+) to synthetic hexasaccharide models of modified heparin has been investigated by NMR and molecular modeling and compared with previous results on a model of regular heparin. These two models represent the regular region of heparin lacking one type of O-sulfate group, either at C-6 of glucosamine or at C-2 of iduronate. The NMR experiments show different responses to the presence of Ca(2+). In the case of the compound lacking O-sulfate groups at C-2, the results are indicative of specific binding similar to that observed for the regular heparin, while the model lacking sulfate groups in position 6 interacts more weakly with Ca(2+). In order to understand the basis of this difference, a molecular modeling study based on a rigid body docking approach of the interaction of these carbohydrates with Ca(2+) and Na(+) was performed. We have found that the results are strongly dependent on the starting orientation of the lateral side chains of the charged groups of the carbohydrate, and that the best agreement with the experimental results is obtained when the starting conformations are taken from previous simulations in the presence of Ca(2+).

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Year:  2004        PMID: 15010305     DOI: 10.1016/j.carres.2003.12.023

Source DB:  PubMed          Journal:  Carbohydr Res        ISSN: 0008-6215            Impact factor:   2.104


  8 in total

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Review 5.  Exopolysaccharides produced by marine bacteria and their applications as glycosaminoglycan-like molecules.

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6.  Residual dipolar coupling investigation of a heparin tetrasaccharide confirms the limited effect of flexibility of the iduronic acid on the molecular shape of heparin.

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7.  Enhanced Antiviral Function of Magnesium Chloride-Modified Heparin on a Broad Spectrum of Viruses.

Authors:  Kemal Mese; Oskar Bunz; Wolfram Volkwein; Sahithya P B Vemulapalli; Wenli Zhang; Sebastian Schellhorn; Kristin Heenemann; Antje Rueckner; Andreas Sing; Thomas W Vahlenkamp; Anna-Lena Severing; Jian Gao; Malik Aydin; Dominik Jung; Hagen S Bachmann; Kurt S Zänker; Ulrich Busch; Armin Baiker; Christian Griesinger; Anja Ehrhardt
Journal:  Int J Mol Sci       Date:  2021-09-17       Impact factor: 5.923

8.  Heparin binding preference and structures in the fibroblast growth factor family parallel their evolutionary diversification.

Authors:  Yong Li; Changye Sun; Edwin A Yates; Chao Jiang; Mark C Wilkinson; David G Fernig
Journal:  Open Biol       Date:  2016-03       Impact factor: 6.411

  8 in total

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