Literature DB >> 15005161

Transfer function restoration in 3D electron microscopy via iterative data refinement.

C O S Sorzano1, R Marabini, G T Herman, Y Censor, J M Carazo.   

Abstract

Three-dimensional electron microscopy (3D-EM) is a powerful tool for visualizing complex biological systems. As with any other imaging device, the electron microscope introduces a transfer function (called in this field the contrast transfer function, CTF) into the image acquisition process that modulates the various frequencies of the signal. Thus, the 3D reconstructions performed with these CTF-affected projections are also affected by an implicit 3D transfer function. For high-resolution electron microscopy, the effect of the CTF is quite dramatic and limits severely the achievable resolution. In this work we make use of the iterative data refinement (IDR) technique to ameliorate the effect of the CTF. It is demonstrated that the approach can be successfully applied to noisy data.

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Year:  2004        PMID: 15005161     DOI: 10.1088/0031-9155/49/4/003

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  4 in total

Review 1.  3D electron microscopy of biological nanomachines: principles and applications.

Authors:  C O S Sorzano; S Jonic; M Cottevieille; E Larquet; N Boisset; S Marco
Journal:  Eur Biophys J       Date:  2007-07-05       Impact factor: 1.733

2.  Image processing for electron microscopy single-particle analysis using XMIPP.

Authors:  Sjors H W Scheres; Rafael Núñez-Ramírez; Carlos O S Sorzano; José María Carazo; Roberto Marabini
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

3.  Development of basic building blocks for cryo-EM: the emcore and emvis software libraries.

Authors:  José Miguel de la Rosa-Trevín; Pedro Alberto Hernández Viga; Joaquín Otón; Erik Lindahl
Journal:  Acta Crystallogr D Struct Biol       Date:  2020-03-31       Impact factor: 7.652

4.  Error analysis in the determination of the electron microscopical contrast transfer function parameters from experimental power Spectra.

Authors:  Carlos Oscar S Sorzano; Abraham Otero; Estefanía M Olmos; José María Carazo
Journal:  BMC Struct Biol       Date:  2009-03-26
  4 in total

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