Literature DB >> 15000642

The burgeoning field of statistical phylogeography.

L L Knowles1.   

Abstract

In the newly emerging field of statistical phylogeography, consideration of the stochastic nature of genetic processes and explicit reference to theoretical expectations under various models has dramatically transformed how historical processes are studied. Rather than being restricted to ad hoc explanations for observed patterns of genetic variation, assessments about the underlying evolutionary processes are now based on statistical tests of various hypotheses, as well as estimates of the parameters specified by the models. A wide range of demographical and biogeographical processes can be accommodated by these new analytical approaches, providing biologically more realistic models. Because of these advances, statistical phylogeography can provide unprecedented insights about a species' history, including decisive information about the factors that shape patterns of genetic variation, species distributions, and speciation. However, to improve our understanding of such processes, a critical examination and appreciation of the inherent difficulties of historical inference and challenges specific to testing phylogeographical hypotheses are essential. As the field of statistical phylogeography continues to take shape many difficulties have been resolved. Nonetheless, careful attention to the complexities of testing historical hypotheses and further theoretical developments are essential to improving the accuracy of our conclusions about a species' history.

Mesh:

Year:  2004        PMID: 15000642     DOI: 10.1046/j.1420-9101.2003.00644.x

Source DB:  PubMed          Journal:  J Evol Biol        ISSN: 1010-061X            Impact factor:   2.411


  28 in total

1.  Two pulses of diversification across the Isthmus of Tehuantepec in a montane Mexican bird fauna.

Authors:  B R Barber; J Klicka
Journal:  Proc Biol Sci       Date:  2010-04-21       Impact factor: 5.349

2.  Coherent and incoherent inference in phylogeography and human evolution.

Authors:  Alan R Templeton
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-22       Impact factor: 11.205

3.  A separation-of-timescales approach to the coalescent in a continuous population.

Authors:  Jon F Wilkins
Journal:  Genetics       Date:  2004-12       Impact factor: 4.562

4.  Phylogenetic tests of distribution patterns in South Asia: towards an integrative approach.

Authors:  Sayantan Biswas; Samraat S Pawar
Journal:  J Biosci       Date:  2006-03       Impact factor: 1.826

5.  Two waves of diversification in mammals and reptiles of Baja California revealed by hierarchical Bayesian analysis.

Authors:  Adam D Leaché; Sarah C Crews; Michael J Hickerson
Journal:  Biol Lett       Date:  2007-12-22       Impact factor: 3.703

6.  A fast and reliable computational method for estimating population genetic parameters.

Authors:  Daniel A Vasco
Journal:  Genetics       Date:  2008-05-27       Impact factor: 4.562

7.  Environmental niche divergence among three dune shrub sister species with parapatric distributions.

Authors:  Sergio Chozas; Rosa M Chefaoui; Otília Correia; Raúl Bonal; Joaquín Hortal
Journal:  Ann Bot       Date:  2017-05-01       Impact factor: 4.357

8.  Phylogeographic model selection leads to insight into the evolutionary history of four-eyed frogs.

Authors:  Maria Tereza C Thomé; Bryan C Carstens
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-19       Impact factor: 11.205

9.  Population genetic structure of sexual and parthenogenetic damselflies inferred from mitochondrial and nuclear markers.

Authors:  M O Lorenzo-Carballa; H Hadrys; A Cordero-Rivera; J A Andrés
Journal:  Heredity (Edinb)       Date:  2011-09-14       Impact factor: 3.821

Review 10.  Inference of population history by coupling exploratory and model-driven phylogeographic analyses.

Authors:  Ryan C Garrick; Adalgisa Caccone; Paul Sunnucks
Journal:  Int J Mol Sci       Date:  2010-03-24       Impact factor: 5.923

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