Literature DB >> 14990956

Nanospheres for DNA separation chips.

Mari Tabuchi1, Masanori Ueda, Noritada Kaji, Yuichi Yamasaki, Yukio Nagasaki, Kenichi Yoshikawa, Kazunori Kataoka, Yoshinobu Baba.   

Abstract

We report here a technology to carry out separations of a wide range of DNA fragments with high speed and high resolution. The approach uses a nanoparticle medium, core-shell type nanospheres, in conjunction with a pressurization technique during microchip electrophoresis. DNA fragments up to 15 kilobase pairs (kbp) were successfully analyzed within 100 s without observing any saturation in migration rates. DNA fragments migrate in the medium while maintaining their characteristic molecular structure. To guarantee effective DNA loading and electrofocusing in the nanosphere solution, we developed a double pressurization technique. Optimal pressure conditions and concentrations of packed nanospheres are critical to achieve improved DNA separations.

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Year:  2004        PMID: 14990956     DOI: 10.1038/nbt939

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  12 in total

1.  Ultrafast, efficient separations of large-sized dsDNA in a blended polymer matrix by microfluidic chip electrophoresis: a design of experiments approach.

Authors:  Mingyun Sun; Jennifer S Lin; Annelise E Barron
Journal:  Electrophoresis       Date:  2011-10-18       Impact factor: 3.535

Review 2.  Molecular sieving using nanofilters: past, present and future.

Authors:  Jongyoon Han; Jianping Fu; Reto B Schoch
Journal:  Lab Chip       Date:  2007-11-26       Impact factor: 6.799

3.  Novel functionalized ternary copolymer fluorescent nanoparticles: synthesis, fluorescent characteristics and protein immobilization.

Authors:  Maolin Lu; Daocheng Wu; Na Guo
Journal:  J Mater Sci Mater Med       Date:  2008-10-07       Impact factor: 3.896

Review 4.  Beyond gel electrophoresis: microfluidic separations, fluorescence burst analysis, and DNA stretching.

Authors:  Kevin D Dorfman; Scott B King; Daniel W Olson; Joel D P Thomas; Douglas R Tree
Journal:  Chem Rev       Date:  2012-11-12       Impact factor: 60.622

5.  Immunoglobulin G and bovine serum albumin streaming dielectrophoresis in a microfluidic device.

Authors:  Asuka Nakano; Tzu-Chiao Chao; Fernanda Camacho-Alanis; Alexandra Ros
Journal:  Electrophoresis       Date:  2011-07-27       Impact factor: 3.535

6.  Non-ionic, thermo-responsive DEA/DMA nanogels: synthesis, characterization, and use for DNA separations by microchip electrophoresis.

Authors:  Xihua Lu; Mingyun Sun; Annelise E Barron
Journal:  J Colloid Interface Sci       Date:  2011-02-01       Impact factor: 8.128

7.  Pulsed-field separation of particles in a microfluidic device.

Authors:  J Regtmeier; R Eichhorn; T T Duong; P Reimann; D Anselmetti; A Ros
Journal:  Eur Phys J E Soft Matter       Date:  2007-05-11       Impact factor: 1.624

8.  Three-dimensional Nanowire Structures for Ultra-Fast Separation of DNA, Protein and RNA Molecules.

Authors:  Sakon Rahong; Takao Yasui; Takeshi Yanagida; Kazuki Nagashima; Masaki Kanai; Gang Meng; Yong He; Fuwei Zhuge; Noritada Kaji; Tomoji Kawai; Yoshinobu Baba
Journal:  Sci Rep       Date:  2015-06-15       Impact factor: 4.379

Review 9.  Microtechnologies for membrane protein studies.

Authors:  Hiroaki Suzuki; Shoji Takeuchi
Journal:  Anal Bioanal Chem       Date:  2008-03-12       Impact factor: 4.142

10.  Ultrafast and wide range analysis of DNA molecules using rigid network structure of solid nanowires.

Authors:  Sakon Rahong; Takao Yasui; Takeshi Yanagida; Kazuki Nagashima; Masaki Kanai; Annop Klamchuen; Gang Meng; Yong He; Fuwei Zhuge; Noritada Kaji; Tomoji Kawai; Yoshinobu Baba
Journal:  Sci Rep       Date:  2014-06-11       Impact factor: 4.379

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