Literature DB >> 14990786

Elastic coupling of integral membrane protein stability to lipid bilayer forces.

Heedeok Hong1, Lukas K Tamm.   

Abstract

It has been traditionally difficult to measure the thermodynamic stability of membrane proteins because fully reversible protocols for complete folding these proteins were not available. Knowledge of the thermodynamic stability of membrane proteins is desirable not only from a fundamental theoretical standpoint, but is also of enormous practical interest for the rational design of membrane proteins and for optimizing conditions for their structure determination by crystallography or NMR. Here, we describe the design of a fully reversible system to study equilibrium folding of the outer membrane protein A from Escherichia coli in lipid bilayers. Folding is shown to be two-state under appropriate conditions permitting data analysis with a classical folding model developed for soluble proteins. The resulting free energy and m value, i.e., a measure of cooperativity, of unfolding are DeltaG(u,H2O)(o)=3.4 kcal/mol and m = 1.1 kcal/mol M(-1), respectively, in a reference bilayer composed of palmitoyl-oleoyl-phosphatidylcholine (C(16:0)C(18:1)PC) and palmitoyloleoyl-phosphatidylglycerol (C(16:0)C(18:1)PG). These values are strong functions of the lipid bilayer environment. By systematic variation of lipid headgroup and chain composition, we show that elastic bilayer forces such as curvature stress and hydrophobic mismatch modulate the free energy and cooperativity of folding of this and perhaps many other membrane proteins.

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Year:  2004        PMID: 14990786      PMCID: PMC384696          DOI: 10.1073/pnas.0400358101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

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Journal:  Protein Sci       Date:  1993-11       Impact factor: 6.725

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Journal:  Biochemistry       Date:  1987-01-13       Impact factor: 3.162

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Journal:  Chem Phys Lipids       Date:  1994-09-06       Impact factor: 3.329

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  90 in total

1.  Membrane proteins: a new method enters the fold.

Authors:  James U Bowie
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-15       Impact factor: 11.205

2.  High speed bio-AFM reveals motion of membrane proteins driven by hydrophobic mismatch with nm precision in label-free fashion.

Authors:  Peter Hinterdorfer
Journal:  Biophys J       Date:  2010-10-06       Impact factor: 4.033

3.  Rapid chemical decontamination of infectious CJD and scrapie particles parallels treatments known to disrupt microbes and biofilms.

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Journal:  Virulence       Date:  2015       Impact factor: 5.882

4.  De novo design of defined helical bundles in membrane environments.

Authors:  Basar Bilgiçer; Krishna Kumar
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-14       Impact factor: 11.205

5.  Membrane elastic fluctuations and the insertion and tilt of beta-barrel proteins.

Authors:  Derek Marsh; Baladhandapani Shanmugavadivu; Jörg H Kleinschmidt
Journal:  Biophys J       Date:  2006-04-14       Impact factor: 4.033

6.  Curvature elasticity and refolding of OmpA in large unilamellar vesicles.

Authors:  Cosmin L Pocanschi; Geetika J Patel; Derek Marsh; Jörg H Kleinschmidt
Journal:  Biophys J       Date:  2006-08-04       Impact factor: 4.033

7.  Molecular dynamics simulations of model trans-membrane peptides in lipid bilayers: a systematic investigation of hydrophobic mismatch.

Authors:  Senthil K Kandasamy; Ronald G Larson
Journal:  Biophys J       Date:  2006-01-20       Impact factor: 4.033

8.  Positioning of proteins in membranes: a computational approach.

Authors:  Andrei L Lomize; Irina D Pogozheva; Mikhail A Lomize; Henry I Mosberg
Journal:  Protein Sci       Date:  2006-06       Impact factor: 6.725

9.  Beta-barrel proteins that reside in the Escherichia coli outer membrane in vivo demonstrate varied folding behavior in vitro.

Authors:  Nancy K Burgess; Thuy P Dao; Ann Marie Stanley; Karen G Fleming
Journal:  J Biol Chem       Date:  2008-07-19       Impact factor: 5.157

10.  Effects of tryptophan microenvironment, soluble domain, and vesicle size on the thermodynamics of membrane protein folding: lessons from the transmembrane protein OmpA.

Authors:  Katheryn M Sanchez; Jonathan E Gable; Diana E Schlamadinger; Judy E Kim
Journal:  Biochemistry       Date:  2008-12-02       Impact factor: 3.162

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