Literature DB >> 14990448

SaRAD: a Simple and Robust Abbreviation Dictionary.

Eytan Adar1.   

Abstract

MOTIVATION: Due to recent interest in the use of textual material to augment traditional experiments it has become necessary to automatically cluster, classify and filter natural language information.
RESULTS: The Simple and Robust Abbreviation Dictionary (SaRAD) provides an easy to implement, high performance tool for the construction of a biomedical symbol dictionary. The algorithms, applied to the MEDLINE document set, result in a high quality dictionary and toolset to disambiguate abbreviation symbols automatically.

Mesh:

Year:  2004        PMID: 14990448     DOI: 10.1093/bioinformatics/btg439

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  12 in total

1.  A study of abbreviations in clinical notes.

Authors:  Hua Xu; Peter D Stetson; Carol Friedman
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

2.  Methods for building sense inventories of abbreviations in clinical notes.

Authors:  Hua Xu; Peter D Stetson; Carol Friedman
Journal:  J Am Med Inform Assoc       Date:  2008-10-24       Impact factor: 4.497

3.  A sense inventory for clinical abbreviations and acronyms created using clinical notes and medical dictionary resources.

Authors:  Sungrim Moon; Serguei Pakhomov; Nathan Liu; James O Ryan; Genevieve B Melton
Journal:  J Am Med Inform Assoc       Date:  2013-06-27       Impact factor: 4.497

Review 4.  Recent progress in automatically extracting information from the pharmacogenomic literature.

Authors:  Yael Garten; Adrien Coulet; Russ B Altman
Journal:  Pharmacogenomics       Date:  2010-10       Impact factor: 2.533

5.  A new clustering method for detecting rare senses of abbreviations in clinical notes.

Authors:  Hua Xu; Yonghui Wu; Noémie Elhadad; Peter D Stetson; Carol Friedman
Journal:  J Biomed Inform       Date:  2012-06-25       Impact factor: 6.317

6.  BIOADI: a machine learning approach to identifying abbreviations and definitions in biological literature.

Authors:  Cheng-Ju Kuo; Maurice H T Ling; Kuan-Ting Lin; Chun-Nan Hsu
Journal:  BMC Bioinformatics       Date:  2009-12-03       Impact factor: 3.169

7.  Building a high-quality sense inventory for improved abbreviation disambiguation.

Authors:  Naoaki Okazaki; Sophia Ananiadou; Jun'ichi Tsujii
Journal:  Bioinformatics       Date:  2010-03-25       Impact factor: 6.937

8.  Gene and protein nomenclature in public databases.

Authors:  Katrin Fundel; Ralf Zimmer
Journal:  BMC Bioinformatics       Date:  2006-08-09       Impact factor: 3.169

9.  Biomedical term mapping databases.

Authors:  Jonathan D Wren; Jeffrey T Chang; James Pustejovsky; Eytan Adar; Harold R Garner; Russ B Altman
Journal:  Nucleic Acids Res       Date:  2005-01-01       Impact factor: 16.971

10.  A comparison study on algorithms of detecting long forms for short forms in biomedical text.

Authors:  Manabu Torii; Zhang-zhi Hu; Min Song; Cathy H Wu; Hongfang Liu
Journal:  BMC Bioinformatics       Date:  2007-11-27       Impact factor: 3.169

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