Literature DB >> 14973139

Reconstitution of F factor DNA replication in vitro with purified proteins.

S Zzaman1, Mayuresh M Abhyankar, Deepak Bastia.   

Abstract

Jacob, Brenner, and Cuzin pioneered the development of the F plasmid as a model system to study replication control, and these investigations led to the development of the "replicon model" (Jacob, F., Brenner, S., and Cuzin, F. (1964) Cold Spring Harbor Symp. Quant. Biol. 28, 329-348). To elucidate further the mechanism of initiation of replication of this plasmid and its control, we have reconstituted its replication in vitro with 21 purified host-encoded proteins and the plasmid-encoded initiator RepE. The replication in vitro was specifically initiated at the F ori (oriV) and required both the bacterial initiator protein DnaA and the plasmid-encoded initiator RepE. The wild type dimeric RepE was inactive in catalyzing replication, whereas a monomeric mutant form called RepE(*) (R118P) was capable of catalyzing vigorous replication. The replication topology was mostly of the Cairns form, and the fork movement was unidirectional and mostly from right to left. The replication was dependent on the HU protein, and the structurally and functionally related DNA bending protein IHF could not efficiently substitute for HU. The priming was dependent on DnaG primase. Many of the characteristics of the in vitro replication closely mimicked those of in vivo replication. We believe that the in vitro system should be very useful in unraveling the mechanism of replication initiation and its control.

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Year:  2004        PMID: 14973139     DOI: 10.1074/jbc.M400021200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  8 in total

1.  Role of DnaJ G/F-rich domain in conformational recognition and binding of protein substrates.

Authors:  Judit Perales-Calvo; Arturo Muga; Fernando Moro
Journal:  J Biol Chem       Date:  2010-08-20       Impact factor: 5.157

2.  Structural insights into the chaperone activity of the 40-kDa heat shock protein DnaJ: binding and remodeling of a native substrate.

Authors:  Jorge Cuéllar; Judit Perales-Calvo; Arturo Muga; José María Valpuesta; Fernando Moro
Journal:  J Biol Chem       Date:  2013-04-11       Impact factor: 5.157

3.  Investigations of pi initiator protein-mediated interaction between replication origins alpha and gamma of the plasmid R6K.

Authors:  Mukesh Saxena; Samarendra Singh; Shamsu Zzaman; Deepak Bastia
Journal:  J Biol Chem       Date:  2009-12-22       Impact factor: 5.157

4.  Sequence of conjugative plasmid pIP1206 mediating resistance to aminoglycosides by 16S rRNA methylation and to hydrophilic fluoroquinolones by efflux.

Authors:  Bruno Périchon; Pierre Bogaerts; Thierry Lambert; Lionel Frangeul; Patrice Courvalin; Marc Galimand
Journal:  Antimicrob Agents Chemother       Date:  2008-05-05       Impact factor: 5.191

5.  Replication initiation at a distance: determination of the cis- and trans-acting elements of replication origin alpha of plasmid R6K.

Authors:  Mukesh Saxena; Mayuresh Abhyankar; Deepak Bastia
Journal:  J Biol Chem       Date:  2009-12-15       Impact factor: 5.157

6.  The Escherichia coli histone-like protein HU has a role in stationary phase adaptive mutation.

Authors:  Ashley B Williams; Patricia L Foster
Journal:  Genetics       Date:  2007-08-24       Impact factor: 4.562

Review 7.  Opening the Strands of Replication Origins-Still an Open Question.

Authors:  Jyoti K Jha; Revathy Ramachandran; Dhruba K Chattoraj
Journal:  Front Mol Biosci       Date:  2016-09-30

Review 8.  Replisome Assembly at Bacterial Chromosomes and Iteron Plasmids.

Authors:  Katarzyna E Wegrzyn; Marta Gross; Urszula Uciechowska; Igor Konieczny
Journal:  Front Mol Biosci       Date:  2016-08-11
  8 in total

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