Literature DB >> 14971938

Noncovalent interactions: defining cooperativity. Ligand binding aided by reduced dynamic behavior of receptors. Binding of bacterial cell wall analogues to ristocetin A.

Dudley H Williams1, Nichola L Davies, Rosa Zerella, Ben Bardsley.   

Abstract

Changes in the relative populations of the monomer and asymmetric dimer forms of ristocetin A, upon binding of two molecules of ligand, suggest that ligand binding is negatively cooperative with respect to dimerization. However, strong hydrogen bonds formed in the binding sites of the ligands are reinforced in the dimer relative to the monomer, and the barrier to dissociation of the dimer is increased upon binding of the ligands. It is concluded that the interactions which are common in the binding of both ligands are made with positive cooperativity with respect to those involved in dimerization. The conclusions are relevant to the binding of ligands to proteins, where ligand binding energy can be derived from stabilization of the protein in its ligand-bound form.

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Year:  2004        PMID: 14971938     DOI: 10.1021/ja039409p

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  1 in total

1.  Single-molecule kinetics reveals signatures of half-sites reactivity in dihydroorotate dehydrogenase A catalysis.

Authors:  Jue Shi; Joe Dertouzos; Ari Gafni; Duncan Steel; Bruce A Palfey
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-03       Impact factor: 11.205

  1 in total

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