Literature DB >> 14970720

Integration of chicken genomic resources to enable whole-genome sequencing.

J Aerts1, R Crooijmans, S Cornelissen, K Hemmatian, T Veenendaal, A Jaadar, J van der Poel, V Fillon, A Vignal, M Groenen.   

Abstract

Different genomic resources in chicken were integrated through the Wageningen chicken BAC library. First, a BAC anchor map was created by screening this library with two sets of markers: microsatellite markers from the consensus linkage map and markers created from BAC end sequencing in chromosome walking experiments. Second, HINdIII digestion fingerprints were created for all BACs of the Wageningen chicken BAC library. Third, cytogenetic positions of BACs were assigned by FISH. These integrated resources will facilitate further chromosome-walking experiments and whole-genome sequencing. Copyright 2003 S. Karger AG, Basel

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Year:  2003        PMID: 14970720     DOI: 10.1159/000075766

Source DB:  PubMed          Journal:  Cytogenet Genome Res        ISSN: 1424-8581            Impact factor:   1.636


  5 in total

1.  A radiation hybrid map of chicken Chromosome 4.

Authors:  Tarik S K M Rabie; Richard P M A Crooijmans; Mireille Morisson; Joanna Andryszkiewicz; Jan J van der Poel; Alain Vignal; Martien A M Groenen
Journal:  Mamm Genome       Date:  2004-07       Impact factor: 2.957

2.  The chicken frizzle feather is due to an α-keratin (KRT75) mutation that causes a defective rachis.

Authors:  Chen Siang Ng; Ping Wu; John Foley; Anne Foley; Merry-Lynn McDonald; Wen-Tau Juan; Chih-Jen Huang; Yu-Ting Lai; Wen-Sui Lo; Chih-Feng Chen; Suzanne M Leal; Huanmin Zhang; Randall B Widelitz; Pragna I Patel; Wen-Hsiung Li; Cheng-Ming Chuong
Journal:  PLoS Genet       Date:  2012-07-19       Impact factor: 5.917

3.  Integrated maps in quail (Coturnix japonica) confirm the high degree of synteny conservation with chicken (Gallus gallus) despite 35 million years of divergence.

Authors:  Boniface B Kayang; Valérie Fillon; Miho Inoue-Murayama; Mitsuru Miwa; Sophie Leroux; Katia Fève; Jean-Louis Monvoisin; Frédérique Pitel; Matthieu Vignoles; Céline Mouilhayrat; Catherine Beaumont; Shin'ichi Ito; Francis Minvielle; Alain Vignal
Journal:  BMC Genomics       Date:  2006-05-02       Impact factor: 3.969

4.  Duck (Anas platyrhynchos) linkage mapping by AFLP fingerprinting.

Authors:  Chang-Wen Huang; Yu-Shin Cheng; Roger Rouvier; Kuo-Tai Yang; Chean-Ping Wu; Hsiu-Lin Huang; Mu-Chiou Huang
Journal:  Genet Sel Evol       Date:  2009-03-17       Impact factor: 4.297

5.  Development of a chicken 5 K microarray targeted towards immune function.

Authors:  Jacqueline Smith; David Speed; Paul M Hocking; Richard T Talbot; Winfried G J Degen; Virgil E J C Schijns; Elizabeth J Glass; David W Burt
Journal:  BMC Genomics       Date:  2006-03-13       Impact factor: 3.969

  5 in total

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