Literature DB >> 14968267

A single major chromosomal region controls natural killer cell-like activity in rainbow trout.

Anastasia M Zimmerman1, Jason P Evenhuis, Gary H Thorgaard, Sandra S Ristow.   

Abstract

We report the identification of a single major chromosomal region controlling natural killer (NK) cell-like activity in rainbow trout (Oncorhynchus mykiss). A genetic map based on 484 AFLP and 39 microsatellite genotypes from 106 doubled haploid fish was constructed. These fish were produced by androgenesis from a hybrid of two clonal lines divergent in NK-like activity. NK-like activities for 75 of the doubled haploids were quantified by an in vitro chromium release assay utilizing (51)Cr-labeled YAC-1 target cells. Composite interval mapping revealed a single major quantitative trait locus (QTL) associated with NK-like activity in this rainbow trout model. Genetic mapping revealed this QTL to also be unlinked to: fragmented MHC class I and MHC class II regions, the leukocyte receptor cluster, the natural killer cell enhancement factor ( NKEF) gene, the RAG-1 gene, and two QTL associated with resistance to infectious pancreatic necrosis virus in rainbow trout. Collectively, these results extend the utility of rainbow trout as an immunological model and are consistent with the idea that a single chromosomal region homologous to the natural killer cell complex (NKC) located on syntenic portions of mouse chromosome (Chr) 6, human Chr 12, and rat Chr 4 may exist in a lower vertebrate model.

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Year:  2004        PMID: 14968267     DOI: 10.1007/s00251-004-0645-6

Source DB:  PubMed          Journal:  Immunogenetics        ISSN: 0093-7711            Impact factor:   2.846


  58 in total

Review 1.  Immune inhibitory receptors.

Authors:  J V Ravetch; L L Lanier
Journal:  Science       Date:  2000-10-06       Impact factor: 47.728

Review 2.  Ligands for natural killer cell receptors: redundancy or specificity.

Authors:  A Cerwenka; L L Lanier
Journal:  Immunol Rev       Date:  2001-06       Impact factor: 12.988

3.  Physical and genetic mapping of the rainbow trout major histocompatibility regions: evidence for duplication of the class I region.

Authors:  Ruth B Phillips; Ana Zimmerman; Marc A Noakes; Yniv Palti; Matt R W Morasch; Lisa Eiben; Sandra S Ristow; Gary H Thorgaard; John D Hansen
Journal:  Immunogenetics       Date:  2003-10-18       Impact factor: 2.846

4.  On the use of double haploids for detecting QTL in outbred populations.

Authors:  V A Martinez; W G Hill; S A Knott
Journal:  Heredity (Edinb)       Date:  2002-06       Impact factor: 3.821

5.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

6.  NK-like activity against allogeneic tumour cells demonstrated in the spleen of control and thymectomized Xenopus.

Authors:  T L Horton; P Ritchie; M D Watson; J D Horton
Journal:  Immunol Cell Biol       Date:  1996-08       Impact factor: 5.126

7.  The human natural killer gene complex is located on chromosome 12p12-p13.

Authors:  M Renedo; I Arce; A Rodríguez; M Carretero; L L Lanier; M López-Botet; E Fernández-Ruiz
Journal:  Immunogenetics       Date:  1997       Impact factor: 2.846

Review 8.  Structure of killer cell immunoglobulin-like receptors and their recognition of the class I MHC molecules.

Authors:  J C Boyington; A G Brooks; P D Sun
Journal:  Immunol Rev       Date:  2001-06       Impact factor: 12.988

9.  A detailed linkage map of rainbow trout produced using doubled haploids.

Authors:  W P Young; P A Wheeler; V H Coryell; P Keim; G H Thorgaard
Journal:  Genetics       Date:  1998-02       Impact factor: 4.562

10.  Recognition of human histocompatibility leukocyte antigen (HLA)-E complexed with HLA class I signal sequence-derived peptides by CD94/NKG2 confers protection from natural killer cell-mediated lysis.

Authors:  F Borrego; M Ulbrecht; E H Weiss; J E Coligan; A G Brooks
Journal:  J Exp Med       Date:  1998-03-02       Impact factor: 14.307

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  19 in total

1.  Assignment of rainbow trout linkage groups to specific chromosomes.

Authors:  Ruth B Phillips; Krista M Nichols; Jenefer J DeKoning; Matthew R Morasch; Kimberly A Keatley; Caird Rexroad; Scott A Gahr; Roy G Danzmann; Robert E Drew; Gary H Thorgaard
Journal:  Genetics       Date:  2006-09-01       Impact factor: 4.562

2.  A second generation integrated map of the rainbow trout (Oncorhynchus mykiss) genome: analysis of conserved synteny with model fish genomes.

Authors:  Yniv Palti; Carine Genet; Guangtu Gao; Yuqin Hu; Frank M You; Mekki Boussaha; Caird E Rexroad; Ming-Cheng Luo
Journal:  Mar Biotechnol (NY)       Date:  2011-11-19       Impact factor: 3.619

3.  Confirmation and fine-mapping of a major QTL for resistance to infectious pancreatic necrosis in Atlantic salmon (Salmo salar): population-level associations between markers and trait.

Authors:  Thomas Moen; Matthew Baranski; Anna K Sonesson; Sissel Kjøglum
Journal:  BMC Genomics       Date:  2009-08-07       Impact factor: 3.969

4.  Production of viable homozygous, doubled haploid channel catfish (Ictalurus punctatus).

Authors:  Geoffrey C Waldbieser; Brian G Bosworth; Sylvie M A Quiniou
Journal:  Mar Biotechnol (NY)       Date:  2009-08-27       Impact factor: 3.619

5.  A microsatellite genetic map of the turbot (Scophthalmus maximus).

Authors:  Carmen Bouza; Miguel Hermida; Belén G Pardo; Carlos Fernández; Gloria G Fortes; Jaime Castro; Laura Sánchez; Pablo Presa; Montse Pérez; Andrés Sanjuán; Alejandro de Carlos; José Antonio Alvarez-Dios; Susana Ezcurra; Rosa M Cal; Francesc Piferrer; Paulino Martínez
Journal:  Genetics       Date:  2007-12       Impact factor: 4.562

Review 6.  NK gene complex dynamics and selection for NK cell receptors.

Authors:  Michael G Brown; Anthony A Scalzo
Journal:  Semin Immunol       Date:  2008-07-18       Impact factor: 11.130

7.  A first generation integrated map of the rainbow trout genome.

Authors:  Yniv Palti; Carine Genet; Ming-Cheng Luo; Aurélie Charlet; Guangtu Gao; Yuqin Hu; Cecilia Castaño-Sánchez; Kamila Tabet-Canale; Francine Krieg; Jianbo Yao; Roger L Vallejo; Caird E Rexroad
Journal:  BMC Genomics       Date:  2011-04-07       Impact factor: 3.969

8.  A first generation BAC-based physical map of the rainbow trout genome.

Authors:  Yniv Palti; Ming-Cheng Luo; Yuqin Hu; Carine Genet; Frank M You; Roger L Vallejo; Gary H Thorgaard; Paul A Wheeler; Caird E Rexroad
Journal:  BMC Genomics       Date:  2009-10-08       Impact factor: 3.969

9.  Estimates of linkage disequilibrium and effective population size in rainbow trout.

Authors:  Caird E Rexroad; Roger L Vallejo
Journal:  BMC Genet       Date:  2009-12-14       Impact factor: 2.797

10.  Characterization of the OmyY1 Region on the Rainbow Trout Y Chromosome.

Authors:  Ruth B Phillips; Jenefer J Dekoning; Joseph P Brunelli; Joshua J Faber-Hammond; John D Hansen; Kris A Christensen; Suzy C P Renn; Gary H Thorgaard
Journal:  Int J Genomics       Date:  2013-03-11       Impact factor: 2.326

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