Literature DB >> 14962935

ACID: a database for microarray clone information.

Markus Ringnér1, Srinivas Veerla, Samuel Andersson, Johan Staaf, Jari Häkkinen.   

Abstract

SUMMARY: Array Close Information Database is an online database for information about microarray cDNA clones. For each clone, the database contents include assigned UniGene cluster(s), location in the full-length transcript, assigned gene ontology terms and position in the genome assembly. AVAILABILITY: http://bioinfo.thep.lu.se/acid.html

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Year:  2004        PMID： 14962935     DOI： 10.1093/bioinformatics/bth089

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  7 in total

1.  Comparing functional annotation analyses with Catmap.

Authors:  Thomas Breslin; Patrik Edén; Morten Krogh
Journal:  BMC Bioinformatics       Date:  2004-12-09       Impact factor: 3.169

2.  Prediction of in vivo radiation dose status in radiotherapy patients using ex vivo and in vivo gene expression signatures.

Authors:  Sunirmal Paul; Christopher A Barker; Helen C Turner; Amanda McLane; Suzanne L Wolden; Sally A Amundson
Journal:  Radiat Res       Date:  2011-01-10       Impact factor: 2.841

3.  Poor prognosis in carcinoma is associated with a gene expression signature of aberrant PTEN tumor suppressor pathway activity.

Authors:  Lao H Saal; Peter Johansson; Karolina Holm; Sofia K Gruvberger-Saal; Qing-Bai She; Matthew Maurer; Susan Koujak; Adolfo A Ferrando; Per Malmström; Lorenzo Memeo; Jorma Isola; Pär-Ola Bendahl; Neal Rosen; Hanina Hibshoosh; Markus Ringnér; Ake Borg; Ramon Parsons
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-23       Impact factor: 11.205

4.  Whole genome expression array profiling highlights differences in mucosal defense genes in Barrett's esophagus and esophageal adenocarcinoma.

Authors:  Derek J Nancarrow; Andrew D Clouston; B Mark Smithers; David C Gotley; Paul A Drew; David I Watson; Sonika Tyagi; Nicholas K Hayward; David C Whiteman
Journal:  PLoS One       Date:  2011-07-28       Impact factor: 3.240

5.  Microarray analysis of gliomas reveals chromosomal position-associated gene expression patterns and identifies potential immunotherapy targets.

Authors:  Oscar Persson; Morten Krogh; Lao H Saal; Elisabet Englund; Jian Liu; Ramon Parsons; Nils Mandahl; Ake Borg; Bengt Widegren; Leif G Salford
Journal:  J Neurooncol       Date:  2007-07-17       Impact factor: 4.506

6.  Revealing signaling pathway deregulation by using gene expression signatures and regulatory motif analysis.

Authors:  Yingchun Liu; Markus Ringnér
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

7.  Gene expression profiling in primary breast cancer distinguishes patients developing local recurrence after breast-conservation surgery, with or without postoperative radiotherapy.

Authors:  Emma Niméus-Malmström; Morten Krogh; Per Malmström; Carina Strand; Irma Fredriksson; Per Karlsson; Bo Nordenskjöld; Olle Stål; Görel Ostberg; Carsten Peterson; Mårten Fernö
Journal:  Breast Cancer Res       Date:  2008-04-22       Impact factor: 6.466
  7 in total

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