Literature DB >> 14961291

Potential indicators of stress response identified by expressed sequence tag analysis of hemocytes and embryos from the American oyster, Crassostrea virginica.

Matthew J Jenny1, Amy H Ringwood, Eric R Lacy, Alan J Lewitus, Jason W Kempton, Paul S Gross, Gregory W Warr, Robert W Chapman.   

Abstract

A pilot program was initiated to identify genes from the American oyster, Crassostrea virginica, that are potentially involved in the stress response for use as bioindicators of exposure to environmental pollutants and to toxic and infectious agents. A PCR-based method was used to construct cDNA libraries from pooled embryos and the hemocytes of a single individual. A total of 998 randomly selected clones (expressed sequence tags, ESTs) were sequenced. Approximately 40% of the ESTs are novel sequences. Several potential biomarkers identified include an antimicrobial peptide, recognition molecules (lectin receptors), proteinases and proteinase inhibitors, and a novel metallothionein. Diversity analysis shows that 363 and 286 unique genes were identified from the hemocyte and embryo libraries, respectively, indicating that full-scale EST collection is a valuable approach for the discovery of new genes of potential significance in the molluscan stress response.

Entities:  

Year:  2002        PMID: 14961291     DOI: 10.1007/s10126-001-0072-8

Source DB:  PubMed          Journal:  Mar Biotechnol (NY)        ISSN: 1436-2228            Impact factor:   3.619


  21 in total

1.  Development of expressed sequence tags from the pearl oyster, Pinctada martensii Dunker.

Authors:  Aimin Wang; Yan Wang; Zhifeng Gu; Sifa Li; Yaohua Shi; Ximing Guo
Journal:  Mar Biotechnol (NY)       Date:  2010-05-27       Impact factor: 3.619

2.  Development of expressed sequence tags from the bay scallop, Argopecten irradians irradians.

Authors:  Linsheng Song; Wei Xu; Chenhua Li; Honglei Li; Longtao Wu; Jianhai Xiang; Ximing Guo
Journal:  Mar Biotechnol (NY)       Date:  2006-03-16       Impact factor: 3.619

3.  Identification of immune genes of the Agamaki clam (Sinonovacula constricta) by sequencing and bioinformatic analysis of ESTs.

Authors:  Bingbing Feng; Lingli Dong; Donghong Niu; Shanshan Meng; Bing Zhang; Dabo Liu; Songnian Hu; Jiale Li
Journal:  Mar Biotechnol (NY)       Date:  2009-07-10       Impact factor: 3.619

4.  New resources for marine genomics: bacterial artificial chromosome libraries for the Eastern and Pacific oysters (Crassostrea virginica and C. gigas).

Authors:  Charles Cunningham; Jun-ichi Hikima; Matthew J Jenny; Robert W Chapman; Guang-Chen Fang; Chris Saski; Mats L Lundqvist; Rod A Wing; Pauline M Cupit; Paul S Gross; Greg W Warr; Jeff P Tomkins
Journal:  Mar Biotechnol (NY)       Date:  2006-08-11       Impact factor: 3.619

5.  Transcriptome analysis reveals a rich gene set related to innate immunity in the Eastern oyster (Crassostrea virginica).

Authors:  Linlin Zhang; Li Li; Yabing Zhu; Guofan Zhang; Ximing Guo
Journal:  Mar Biotechnol (NY)       Date:  2013-08-02       Impact factor: 3.619

6.  Modelling interactions of acid-base balance and respiratory status in the toxicity of metal mixtures in the American oyster Crassostrea virginica.

Authors:  Brett M Macey; Matthew J Jenny; Heidi R Williams; Lindy K Thibodeaux; Marion Beal; Jonas S Almeida; Charles Cunningham; Annalaura Mancia; Gregory W Warr; Erin J Burge; A Fred Holland; Paul S Gross; Sonomi Hikima; Karen G Burnett; Louis Burnett; Robert W Chapman
Journal:  Comp Biochem Physiol A Mol Integr Physiol       Date:  2009-12-01       Impact factor: 2.320

7.  Analysis of genes isolated from plated hemocytes of the Pacific oyster, Crassostreas gigas.

Authors:  Steven Roberts; Giles Goetz; Samuel White; Frederick Goetz
Journal:  Mar Biotechnol (NY)       Date:  2008-07-12       Impact factor: 3.619

8.  A cDNA microarray for Crassostrea virginica and C. gigas.

Authors:  Matthew J Jenny; Robert W Chapman; Annalaura Mancia; Yian A Chen; David J McKillen; Hal Trent; Paul Lang; Jean-Michel Escoubas; Evelyne Bachere; Viviane Boulo; Z John Liu; Paul S Gross; Charles Cunningham; Pauline M Cupit; Arnaud Tanguy; Ximing Guo; Dario Moraga; Isabelle Boutet; Arnaud Huvet; Sylvain De Guise; Jonas S Almeida; Gregory W Warr
Journal:  Mar Biotechnol (NY)       Date:  2007-08-01       Impact factor: 3.619

9.  Generation and analysis of ESTs from the eastern oyster, Crassostrea virginica Gmelin and identification of microsatellite and SNP markers.

Authors:  Jonas Quilang; Shaolin Wang; Ping Li; Jason Abernathy; Eric Peatman; Yongping Wang; Lingling Wang; Yaohua Shi; Richard Wallace; Ximing Guo; Zhanjiang Liu
Journal:  BMC Genomics       Date:  2007-06-08       Impact factor: 3.969

10.  Comparative analysis of expressed sequence tag (EST) libraries in the seagrass Zostera marina subjected to temperature stress.

Authors:  Thorsten B H Reusch; Amelie S Veron; Christoph Preuss; January Weiner; Lothar Wissler; Alfred Beck; Sven Klages; Michael Kube; Richard Reinhardt; Erich Bornberg-Bauer
Journal:  Mar Biotechnol (NY)       Date:  2008-01-18       Impact factor: 3.619

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.