Literature DB >> 14960714

The genome sequence of Bacillus cereus ATCC 10987 reveals metabolic adaptations and a large plasmid related to Bacillus anthracis pXO1.

David A Rasko1, Jacques Ravel, Ole Andreas Økstad, Erlendur Helgason, Regina Z Cer, Lingxia Jiang, Kelly A Shores, Derrick E Fouts, Nicolas J Tourasse, Samuel V Angiuoli, James Kolonay, William C Nelson, Anne-Brit Kolstø, Claire M Fraser, Timothy D Read.   

Abstract

We sequenced the complete genome of Bacillus cereus ATCC 10987, a non-lethal dairy isolate in the same genetic subgroup as Bacillus anthracis. Comparison of the chromosomes demonstrated that B.cereus ATCC 10987 was more similar to B.anthracis Ames than B.cereus ATCC 14579, while containing a number of unique metabolic capabilities such as urease and xylose utilization and lacking the ability to utilize nitrate and nitrite. Additionally, genetic mechanisms for variation of capsule carbohydrate and flagella surface structures were identified. Bacillus cereus ATCC 10987 contains a single large plasmid (pBc10987), of approximately 208 kb, that is similar in gene content and organization to B.anthracis pXO1 but is lacking the pathogenicity-associated island containing the anthrax lethal and edema toxin complex genes. The chromosomal similarity of B.cereus ATCC 10987 to B.anthracis Ames, as well as the fact that it contains a large pXO1-like plasmid, may make it a possible model for studying B.anthracis plasmid biology and regulatory cross-talk.

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Year:  2004        PMID: 14960714      PMCID: PMC373394          DOI: 10.1093/nar/gkh258

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  77 in total

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Journal:  Microbiology (Reading)       Date:  1999-11       Impact factor: 2.777

2.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

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Authors:  H Tettelin; K E Nelson; I T Paulsen; J A Eisen; T D Read; S Peterson; J Heidelberg; R T DeBoy; D H Haft; R J Dodson; A S Durkin; M Gwinn; J F Kolonay; W C Nelson; J D Peterson; L A Umayam; O White; S L Salzberg; M R Lewis; D Radune; E Holtzapple; H Khouri; A M Wolf; T R Utterback; C L Hansen; L A McDonald; T V Feldblyum; S Angiuoli; T Dickinson; E K Hickey; I E Holt; B J Loftus; F Yang; H O Smith; J C Venter; B A Dougherty; D A Morrison; S K Hollingshead; C M Fraser
Journal:  Science       Date:  2001-07-20       Impact factor: 47.728

4.  Comparative analysis of Bacillus anthracis, Bacillus cereus, and related species on the basis of reverse transcriptase sequencing of 16S rRNA.

Authors:  C Ash; J A Farrow; M Dorsch; E Stackebrandt; M D Collins
Journal:  Int J Syst Bacteriol       Date:  1991-07

5.  Sequence and organization of pXO1, the large Bacillus anthracis plasmid harboring the anthrax toxin genes.

Authors:  R T Okinaka; K Cloud; O Hampton; A R Hoffmaster; K K Hill; P Keim; T M Koehler; G Lamke; S Kumano; J Mahillon; D Manter; Y Martinez; D Ricke; R Svensson; P J Jackson
Journal:  J Bacteriol       Date:  1999-10       Impact factor: 3.490

6.  A urease-negative mutant of Helicobacter pylori constructed by allelic exchange mutagenesis lacks the ability to colonize the nude mouse stomach.

Authors:  M Tsuda; M Karita; M G Morshed; K Okita; T Nakazawa
Journal:  Infect Immun       Date:  1994-08       Impact factor: 3.441

7.  The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria.

Authors:  Timothy D Read; Scott N Peterson; Nicolas Tourasse; Les W Baillie; Ian T Paulsen; Karen E Nelson; Hervé Tettelin; Derrick E Fouts; Jonathan A Eisen; Steven R Gill; Erik K Holtzapple; Ole Andreas Okstad; Erlendur Helgason; Jennifer Rilstone; Martin Wu; James F Kolonay; Maureen J Beanan; Robert J Dodson; Lauren M Brinkac; Michelle Gwinn; Robert T DeBoy; Ramana Madpu; Sean C Daugherty; A Scott Durkin; Daniel H Haft; William C Nelson; Jeremy D Peterson; Mihai Pop; Hoda M Khouri; Diana Radune; Jonathan L Benton; Yasmin Mahamoud; Lingxia Jiang; Ioana R Hance; Janice F Weidman; Kristi J Berry; Roger D Plaut; Alex M Wolf; Kisha L Watkins; William C Nierman; Alyson Hazen; Robin Cline; Caroline Redmond; Joanne E Thwaite; Owen White; Steven L Salzberg; Brendan Thomason; Arthur M Friedlander; Theresa M Koehler; Philip C Hanna; Anne-Brit Kolstø; Claire M Fraser
Journal:  Nature       Date:  2003-05-01       Impact factor: 49.962

Review 8.  The hidden lifestyles of Bacillus cereus and relatives.

Authors:  G B Jensen; B M Hansen; J Eilenberg; J Mahillon
Journal:  Environ Microbiol       Date:  2003-08       Impact factor: 5.491

9.  Bacillus anthracis pXO1 virulence plasmid encodes a type 1 DNA topoisomerase.

Authors:  A Fouet; J C Sirard; M Mock
Journal:  Mol Microbiol       Date:  1994-02       Impact factor: 3.501

10.  Polysaccharides of the genus Bacillus cross-reactive with the capsular polysaccharides of Diplococcus pneumoniae type 3, Haemophilus influenzae type b, and Neisseria meningitidis group A.

Authors:  R L Myerowitz; R E Gordon; J B Robbins
Journal:  Infect Immun       Date:  1973-12       Impact factor: 3.441

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  110 in total

1.  Quantification of the effect of culturing temperature on salt-induced heat resistance of bacillus species.

Authors:  Heidy M W den Besten; Eric-Jan van der Mark; Lonneke Hensen; Tjakko Abee; Marcel H Zwietering
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2.  Thermophilic, reversible gamma-resorcylate decarboxylase from Rhizobium sp. strain MTP-10005: purification, molecular characterization, and expression.

Authors:  Masahiro Yoshida; Nobuhiro Fukuhara; Tadao Oikawa
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

3.  Inference of homologous recombination in bacteria using whole-genome sequences.

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Journal:  Genetics       Date:  2010-10-05       Impact factor: 4.562

4.  Bifidobacterium animalis subsp. lactis ATCC 27673 is a genomically unique strain within its conserved subspecies.

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5.  Characterization of germination receptors of Bacillus cereus ATCC 14579.

Authors:  Luc M Hornstra; Ynte P de Vries; Marjon H J Wells-Bennik; Willem M de Vos; Tjakko Abee
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6.  Autoinducer 2 affects biofilm formation by Bacillus cereus.

Authors:  Sandrine Auger; Evelyne Krin; Stéphane Aymerich; Michel Gohar
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

7.  Global divergence of microbial genome sequences mediated by propagating fronts.

Authors:  Kalin Vetsigian; Nigel Goldenfeld
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-05       Impact factor: 11.205

8.  The tubulin-like RepX protein encoded by the pXO1 plasmid forms polymers in vivo in Bacillus anthracis.

Authors:  Parvez Akhtar; Syam P Anand; Simon C Watkins; Saleem A Khan
Journal:  J Bacteriol       Date:  2009-02-20       Impact factor: 3.490

9.  A Bacillus anthracis-based in vitro system supports replication of plasmid pXO2 as well as rolling-circle-replicating plasmids.

Authors:  Eowyn Tinsley; Saleem A Khan
Journal:  Appl Environ Microbiol       Date:  2007-06-15       Impact factor: 4.792

10.  A novel FtsZ-like protein is involved in replication of the anthrax toxin-encoding pXO1 plasmid in Bacillus anthracis.

Authors:  Eowyn Tinsley; Saleem A Khan
Journal:  J Bacteriol       Date:  2006-04       Impact factor: 3.490

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