Literature DB >> 14960469

Predicting protein secondary structure by cascade-correlation neural networks.

Matthew J Wood1, Jonathan D Hirst.   

Abstract

The back-propagation neural network algorithm is a commonly used method for predicting the secondary structure of proteins. Whilst popular, this method can be slow to learn and here we compare it with an alternative: the cascade-correlation architecture. Using a constructive algorithm, cascade-correlation achieves predictive accuracies comparable to those obtained by back-propagation, in shorter time.

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Year:  2004        PMID: 14960469     DOI: 10.1093/bioinformatics/btg423

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  2 in total

1.  Use of secondary structural information and C alpha-C alpha distance restraints to model protein structures with MODELLER.

Authors:  Boojala V B Reddy; Yiannis N Kaznessis
Journal:  J Biosci       Date:  2007-08       Impact factor: 1.826

2.  How many 3D structures do we need to train a predictor?

Authors:  Pantelis G Bagos; Georgios N Tsaousis; Stavros J Hamodrakas
Journal:  Genomics Proteomics Bioinformatics       Date:  2009-09       Impact factor: 7.691

  2 in total

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